Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22970 | 69133;69134;69135 | chr2:178577427;178577426;178577425 | chr2:179442154;179442153;179442152 |
N2AB | 21329 | 64210;64211;64212 | chr2:178577427;178577426;178577425 | chr2:179442154;179442153;179442152 |
N2A | 20402 | 61429;61430;61431 | chr2:178577427;178577426;178577425 | chr2:179442154;179442153;179442152 |
N2B | 13905 | 41938;41939;41940 | chr2:178577427;178577426;178577425 | chr2:179442154;179442153;179442152 |
Novex-1 | 14030 | 42313;42314;42315 | chr2:178577427;178577426;178577425 | chr2:179442154;179442153;179442152 |
Novex-2 | 14097 | 42514;42515;42516 | chr2:178577427;178577426;178577425 | chr2:179442154;179442153;179442152 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.994 | N | 0.525 | 0.212 | 0.18274738541 | gnomAD-4.0.0 | 4.8013E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93751E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1005 | likely_benign | 0.1 | benign | -0.258 | Destabilizing | 0.98 | D | 0.501 | neutral | None | None | None | None | N |
S/C | 0.1475 | likely_benign | 0.1474 | benign | -0.347 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | N | 0.462502516 | None | None | N |
S/D | 0.4128 | ambiguous | 0.4219 | ambiguous | 0.428 | Stabilizing | 0.996 | D | 0.603 | neutral | None | None | None | None | N |
S/E | 0.4879 | ambiguous | 0.5119 | ambiguous | 0.326 | Stabilizing | 0.992 | D | 0.519 | neutral | None | None | None | None | N |
S/F | 0.3536 | ambiguous | 0.361 | ambiguous | -0.936 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
S/G | 0.1218 | likely_benign | 0.1175 | benign | -0.327 | Destabilizing | 0.994 | D | 0.525 | neutral | N | 0.503807633 | None | None | N |
S/H | 0.2888 | likely_benign | 0.2918 | benign | -0.724 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
S/I | 0.3186 | likely_benign | 0.3155 | benign | -0.213 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | N | 0.458446683 | None | None | N |
S/K | 0.5309 | ambiguous | 0.5474 | ambiguous | -0.304 | Destabilizing | 0.398 | N | 0.341 | neutral | None | None | None | None | N |
S/L | 0.1621 | likely_benign | 0.1638 | benign | -0.213 | Destabilizing | 0.996 | D | 0.653 | neutral | None | None | None | None | N |
S/M | 0.2712 | likely_benign | 0.2701 | benign | -0.144 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
S/N | 0.1511 | likely_benign | 0.1432 | benign | -0.09 | Destabilizing | 0.994 | D | 0.59 | neutral | N | 0.487011383 | None | None | N |
S/P | 0.8847 | likely_pathogenic | 0.8493 | pathogenic | -0.202 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
S/Q | 0.3991 | ambiguous | 0.4044 | ambiguous | -0.294 | Destabilizing | 0.998 | D | 0.655 | neutral | None | None | None | None | N |
S/R | 0.4251 | ambiguous | 0.4379 | ambiguous | -0.13 | Destabilizing | 0.978 | D | 0.677 | prob.neutral | N | 0.456843192 | None | None | N |
S/T | 0.0951 | likely_benign | 0.0949 | benign | -0.226 | Destabilizing | 0.994 | D | 0.524 | neutral | N | 0.459382065 | None | None | N |
S/V | 0.2962 | likely_benign | 0.2884 | benign | -0.202 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
S/W | 0.4651 | ambiguous | 0.4858 | ambiguous | -0.979 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
S/Y | 0.2234 | likely_benign | 0.228 | benign | -0.673 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.