Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22976 | 69151;69152;69153 | chr2:178577409;178577408;178577407 | chr2:179442136;179442135;179442134 |
N2AB | 21335 | 64228;64229;64230 | chr2:178577409;178577408;178577407 | chr2:179442136;179442135;179442134 |
N2A | 20408 | 61447;61448;61449 | chr2:178577409;178577408;178577407 | chr2:179442136;179442135;179442134 |
N2B | 13911 | 41956;41957;41958 | chr2:178577409;178577408;178577407 | chr2:179442136;179442135;179442134 |
Novex-1 | 14036 | 42331;42332;42333 | chr2:178577409;178577408;178577407 | chr2:179442136;179442135;179442134 |
Novex-2 | 14103 | 42532;42533;42534 | chr2:178577409;178577408;178577407 | chr2:179442136;179442135;179442134 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.884 | N | 0.422 | 0.258 | 0.411401001288 | gnomAD-4.0.0 | 1.59354E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86074E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1532 | likely_benign | 0.1467 | benign | -0.98 | Destabilizing | 0.373 | N | 0.369 | neutral | None | None | None | None | I |
L/C | 0.4524 | ambiguous | 0.4544 | ambiguous | -0.57 | Destabilizing | 0.996 | D | 0.454 | neutral | None | None | None | None | I |
L/D | 0.5719 | likely_pathogenic | 0.581 | pathogenic | -0.643 | Destabilizing | 0.953 | D | 0.514 | neutral | None | None | None | None | I |
L/E | 0.2825 | likely_benign | 0.2846 | benign | -0.712 | Destabilizing | 0.91 | D | 0.49 | neutral | None | None | None | None | I |
L/F | 0.1424 | likely_benign | 0.1438 | benign | -0.816 | Destabilizing | 0.884 | D | 0.422 | neutral | N | 0.482996083 | None | None | I |
L/G | 0.4698 | ambiguous | 0.4862 | ambiguous | -1.197 | Destabilizing | 0.742 | D | 0.483 | neutral | None | None | None | None | I |
L/H | 0.203 | likely_benign | 0.207 | benign | -0.494 | Destabilizing | 0.994 | D | 0.507 | neutral | D | 0.5261895 | None | None | I |
L/I | 0.0889 | likely_benign | 0.0871 | benign | -0.507 | Destabilizing | 0.521 | D | 0.356 | neutral | N | 0.455252121 | None | None | I |
L/K | 0.2345 | likely_benign | 0.2336 | benign | -0.72 | Destabilizing | 0.91 | D | 0.481 | neutral | None | None | None | None | I |
L/M | 0.1107 | likely_benign | 0.1037 | benign | -0.436 | Destabilizing | 0.953 | D | 0.435 | neutral | None | None | None | None | I |
L/N | 0.2886 | likely_benign | 0.298 | benign | -0.443 | Destabilizing | 0.953 | D | 0.522 | neutral | None | None | None | None | I |
L/P | 0.1025 | likely_benign | 0.0991 | benign | -0.632 | Destabilizing | 0.003 | N | 0.275 | neutral | N | 0.391816718 | None | None | I |
L/Q | 0.1331 | likely_benign | 0.1283 | benign | -0.675 | Destabilizing | 0.953 | D | 0.518 | neutral | None | None | None | None | I |
L/R | 0.202 | likely_benign | 0.1991 | benign | -0.108 | Destabilizing | 0.939 | D | 0.523 | neutral | N | 0.448632793 | None | None | I |
L/S | 0.1806 | likely_benign | 0.1867 | benign | -0.879 | Destabilizing | 0.742 | D | 0.463 | neutral | None | None | None | None | I |
L/T | 0.1613 | likely_benign | 0.1566 | benign | -0.845 | Destabilizing | 0.742 | D | 0.375 | neutral | None | None | None | None | I |
L/V | 0.0896 | likely_benign | 0.085 | benign | -0.632 | Destabilizing | 0.007 | N | 0.125 | neutral | N | 0.42600665 | None | None | I |
L/W | 0.2849 | likely_benign | 0.3045 | benign | -0.86 | Destabilizing | 0.996 | D | 0.593 | neutral | None | None | None | None | I |
L/Y | 0.2849 | likely_benign | 0.2879 | benign | -0.64 | Destabilizing | 0.953 | D | 0.434 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.