Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22983 | 69172;69173;69174 | chr2:178577388;178577387;178577386 | chr2:179442115;179442114;179442113 |
N2AB | 21342 | 64249;64250;64251 | chr2:178577388;178577387;178577386 | chr2:179442115;179442114;179442113 |
N2A | 20415 | 61468;61469;61470 | chr2:178577388;178577387;178577386 | chr2:179442115;179442114;179442113 |
N2B | 13918 | 41977;41978;41979 | chr2:178577388;178577387;178577386 | chr2:179442115;179442114;179442113 |
Novex-1 | 14043 | 42352;42353;42354 | chr2:178577388;178577387;178577386 | chr2:179442115;179442114;179442113 |
Novex-2 | 14110 | 42553;42554;42555 | chr2:178577388;178577387;178577386 | chr2:179442115;179442114;179442113 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs2046672689 | None | 0.638 | N | 0.601 | 0.246 | 0.18274738541 | gnomAD-4.0.0 | 6.84466E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99649E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7964 | likely_pathogenic | 0.7481 | pathogenic | -1.031 | Destabilizing | 0.399 | N | 0.52 | neutral | None | None | None | None | N |
K/C | 0.7652 | likely_pathogenic | 0.7054 | pathogenic | -1.016 | Destabilizing | 0.982 | D | 0.807 | deleterious | None | None | None | None | N |
K/D | 0.9518 | likely_pathogenic | 0.9432 | pathogenic | 0.165 | Stabilizing | 0.7 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/E | 0.6485 | likely_pathogenic | 0.6109 | pathogenic | 0.278 | Stabilizing | 0.201 | N | 0.457 | neutral | N | 0.517600019 | None | None | N |
K/F | 0.8153 | likely_pathogenic | 0.7752 | pathogenic | -1.049 | Destabilizing | 0.947 | D | 0.789 | deleterious | None | None | None | None | N |
K/G | 0.8816 | likely_pathogenic | 0.8558 | pathogenic | -1.346 | Destabilizing | 0.7 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/H | 0.426 | ambiguous | 0.3756 | ambiguous | -1.742 | Destabilizing | 0.947 | D | 0.744 | deleterious | None | None | None | None | N |
K/I | 0.5402 | ambiguous | 0.4647 | ambiguous | -0.217 | Destabilizing | 0.826 | D | 0.785 | deleterious | None | None | None | None | N |
K/L | 0.5585 | ambiguous | 0.4983 | ambiguous | -0.217 | Destabilizing | 0.7 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/M | 0.4344 | ambiguous | 0.3945 | ambiguous | -0.183 | Destabilizing | 0.976 | D | 0.733 | prob.delet. | N | 0.51734653 | None | None | N |
K/N | 0.8505 | likely_pathogenic | 0.8359 | pathogenic | -0.412 | Destabilizing | 0.638 | D | 0.601 | neutral | N | 0.51059858 | None | None | N |
K/P | 0.9864 | likely_pathogenic | 0.9807 | pathogenic | -0.462 | Destabilizing | 0.826 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/Q | 0.3078 | likely_benign | 0.2812 | benign | -0.536 | Destabilizing | 0.468 | N | 0.59 | neutral | N | 0.496101949 | None | None | N |
K/R | 0.0757 | likely_benign | 0.0714 | benign | -0.468 | Destabilizing | 0.002 | N | 0.263 | neutral | N | 0.502754414 | None | None | N |
K/S | 0.8491 | likely_pathogenic | 0.8273 | pathogenic | -1.271 | Destabilizing | 0.399 | N | 0.525 | neutral | None | None | None | None | N |
K/T | 0.6337 | likely_pathogenic | 0.5854 | pathogenic | -0.945 | Destabilizing | 0.638 | D | 0.675 | prob.neutral | N | 0.494051261 | None | None | N |
K/V | 0.5307 | ambiguous | 0.4563 | ambiguous | -0.462 | Destabilizing | 0.7 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/W | 0.8171 | likely_pathogenic | 0.7732 | pathogenic | -0.828 | Destabilizing | 0.982 | D | 0.788 | deleterious | None | None | None | None | N |
K/Y | 0.6926 | likely_pathogenic | 0.6443 | pathogenic | -0.505 | Destabilizing | 0.826 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.