Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22987 | 69184;69185;69186 | chr2:178577376;178577375;178577374 | chr2:179442103;179442102;179442101 |
N2AB | 21346 | 64261;64262;64263 | chr2:178577376;178577375;178577374 | chr2:179442103;179442102;179442101 |
N2A | 20419 | 61480;61481;61482 | chr2:178577376;178577375;178577374 | chr2:179442103;179442102;179442101 |
N2B | 13922 | 41989;41990;41991 | chr2:178577376;178577375;178577374 | chr2:179442103;179442102;179442101 |
Novex-1 | 14047 | 42364;42365;42366 | chr2:178577376;178577375;178577374 | chr2:179442103;179442102;179442101 |
Novex-2 | 14114 | 42565;42566;42567 | chr2:178577376;178577375;178577374 | chr2:179442103;179442102;179442101 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs749120610 | 0.375 | 0.904 | N | 0.545 | 0.213 | 0.266843984389 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.68067E-04 | None | 0 | None | 0 | 0 | 0 |
D/N | rs749120610 | 0.375 | 0.904 | N | 0.545 | 0.213 | 0.266843984389 | gnomAD-4.0.0 | 1.27391E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.22408E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1408 | likely_benign | 0.1238 | benign | -0.255 | Destabilizing | 0.822 | D | 0.528 | neutral | N | 0.45057702 | None | None | N |
D/C | 0.516 | ambiguous | 0.4588 | ambiguous | 0.138 | Stabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | N |
D/E | 0.1036 | likely_benign | 0.0911 | benign | -0.252 | Destabilizing | 0.025 | N | 0.199 | neutral | N | 0.387237618 | None | None | N |
D/F | 0.4242 | ambiguous | 0.3724 | ambiguous | -0.28 | Destabilizing | 0.915 | D | 0.612 | neutral | None | None | None | None | N |
D/G | 0.1653 | likely_benign | 0.1507 | benign | -0.426 | Destabilizing | 0.904 | D | 0.529 | neutral | N | 0.501083199 | None | None | N |
D/H | 0.2472 | likely_benign | 0.2158 | benign | -0.146 | Destabilizing | 0.942 | D | 0.547 | neutral | N | 0.506835735 | None | None | N |
D/I | 0.1984 | likely_benign | 0.1622 | benign | 0.143 | Stabilizing | 0.956 | D | 0.617 | neutral | None | None | None | None | N |
D/K | 0.3226 | likely_benign | 0.2836 | benign | 0.455 | Stabilizing | 0.86 | D | 0.551 | neutral | None | None | None | None | N |
D/L | 0.2615 | likely_benign | 0.2292 | benign | 0.143 | Stabilizing | 0.915 | D | 0.538 | neutral | None | None | None | None | N |
D/M | 0.4179 | ambiguous | 0.3569 | ambiguous | 0.301 | Stabilizing | 0.998 | D | 0.631 | neutral | None | None | None | None | N |
D/N | 0.0989 | likely_benign | 0.0868 | benign | 0.172 | Stabilizing | 0.904 | D | 0.545 | neutral | N | 0.475782109 | None | None | N |
D/P | 0.4169 | ambiguous | 0.3667 | ambiguous | 0.032 | Stabilizing | 0.993 | D | 0.537 | neutral | None | None | None | None | N |
D/Q | 0.2649 | likely_benign | 0.2373 | benign | 0.197 | Stabilizing | 0.956 | D | 0.467 | neutral | None | None | None | None | N |
D/R | 0.3852 | ambiguous | 0.3412 | ambiguous | 0.523 | Stabilizing | 0.956 | D | 0.577 | neutral | None | None | None | None | N |
D/S | 0.1352 | likely_benign | 0.1181 | benign | 0.092 | Stabilizing | 0.86 | D | 0.5 | neutral | None | None | None | None | N |
D/T | 0.1796 | likely_benign | 0.1524 | benign | 0.23 | Stabilizing | 0.926 | D | 0.539 | neutral | None | None | None | None | N |
D/V | 0.1259 | likely_benign | 0.108 | benign | 0.032 | Stabilizing | 0.942 | D | 0.546 | neutral | N | 0.461236731 | None | None | N |
D/W | 0.8226 | likely_pathogenic | 0.8014 | pathogenic | -0.172 | Destabilizing | 0.994 | D | 0.649 | neutral | None | None | None | None | N |
D/Y | 0.1621 | likely_benign | 0.1512 | benign | -0.046 | Destabilizing | 0.032 | N | 0.399 | neutral | N | 0.490386202 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.