Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22999 | 69220;69221;69222 | chr2:178577340;178577339;178577338 | chr2:179442067;179442066;179442065 |
N2AB | 21358 | 64297;64298;64299 | chr2:178577340;178577339;178577338 | chr2:179442067;179442066;179442065 |
N2A | 20431 | 61516;61517;61518 | chr2:178577340;178577339;178577338 | chr2:179442067;179442066;179442065 |
N2B | 13934 | 42025;42026;42027 | chr2:178577340;178577339;178577338 | chr2:179442067;179442066;179442065 |
Novex-1 | 14059 | 42400;42401;42402 | chr2:178577340;178577339;178577338 | chr2:179442067;179442066;179442065 |
Novex-2 | 14126 | 42601;42602;42603 | chr2:178577340;178577339;178577338 | chr2:179442067;179442066;179442065 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs755306597 | -0.178 | 0.984 | D | 0.485 | 0.31 | 0.535202146198 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
T/I | rs755306597 | -0.178 | 0.984 | D | 0.485 | 0.31 | 0.535202146198 | gnomAD-4.0.0 | 1.57403E-05 | None | None | None | None | N | None | 0 | 6.70961E-05 | None | 0 | 0 | None | 0 | 0 | 1.79921E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1311 | likely_benign | 0.1185 | benign | -0.374 | Destabilizing | 0.64 | D | 0.401 | neutral | N | 0.485940388 | None | None | N |
T/C | 0.5917 | likely_pathogenic | 0.5132 | ambiguous | -0.14 | Destabilizing | 0.999 | D | 0.521 | neutral | None | None | None | None | N |
T/D | 0.4075 | ambiguous | 0.3693 | ambiguous | 0.205 | Stabilizing | 0.976 | D | 0.399 | neutral | None | None | None | None | N |
T/E | 0.4029 | ambiguous | 0.3602 | ambiguous | 0.109 | Stabilizing | 0.851 | D | 0.388 | neutral | None | None | None | None | N |
T/F | 0.3609 | ambiguous | 0.3136 | benign | -1.061 | Destabilizing | 0.996 | D | 0.585 | neutral | None | None | None | None | N |
T/G | 0.1956 | likely_benign | 0.1844 | benign | -0.435 | Destabilizing | 0.034 | N | 0.27 | neutral | None | None | None | None | N |
T/H | 0.3501 | ambiguous | 0.2807 | benign | -0.857 | Destabilizing | 0.999 | D | 0.59 | neutral | None | None | None | None | N |
T/I | 0.3314 | likely_benign | 0.276 | benign | -0.335 | Destabilizing | 0.984 | D | 0.485 | neutral | D | 0.532867543 | None | None | N |
T/K | 0.2397 | likely_benign | 0.2014 | benign | -0.168 | Destabilizing | 0.076 | N | 0.239 | neutral | None | None | None | None | N |
T/L | 0.1328 | likely_benign | 0.1162 | benign | -0.335 | Destabilizing | 0.919 | D | 0.399 | neutral | None | None | None | None | N |
T/M | 0.1326 | likely_benign | 0.1192 | benign | 0.003 | Stabilizing | 0.999 | D | 0.49 | neutral | None | None | None | None | N |
T/N | 0.1251 | likely_benign | 0.1147 | benign | 0.063 | Stabilizing | 0.968 | D | 0.387 | neutral | N | 0.498984256 | None | None | N |
T/P | 0.4523 | ambiguous | 0.4394 | ambiguous | -0.324 | Destabilizing | 0.984 | D | 0.49 | neutral | N | 0.496052038 | None | None | N |
T/Q | 0.3154 | likely_benign | 0.2694 | benign | -0.194 | Destabilizing | 0.976 | D | 0.482 | neutral | None | None | None | None | N |
T/R | 0.2688 | likely_benign | 0.2309 | benign | 0.017 | Stabilizing | 0.952 | D | 0.438 | neutral | None | None | None | None | N |
T/S | 0.0947 | likely_benign | 0.0864 | benign | -0.123 | Destabilizing | 0.896 | D | 0.379 | neutral | N | 0.499349615 | None | None | N |
T/V | 0.2667 | likely_benign | 0.2202 | benign | -0.324 | Destabilizing | 0.959 | D | 0.37 | neutral | None | None | None | None | N |
T/W | 0.778 | likely_pathogenic | 0.7366 | pathogenic | -1.083 | Destabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | N |
T/Y | 0.3987 | ambiguous | 0.3467 | ambiguous | -0.781 | Destabilizing | 0.996 | D | 0.59 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.