Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23005 | 69238;69239;69240 | chr2:178577322;178577321;178577320 | chr2:179442049;179442048;179442047 |
N2AB | 21364 | 64315;64316;64317 | chr2:178577322;178577321;178577320 | chr2:179442049;179442048;179442047 |
N2A | 20437 | 61534;61535;61536 | chr2:178577322;178577321;178577320 | chr2:179442049;179442048;179442047 |
N2B | 13940 | 42043;42044;42045 | chr2:178577322;178577321;178577320 | chr2:179442049;179442048;179442047 |
Novex-1 | 14065 | 42418;42419;42420 | chr2:178577322;178577321;178577320 | chr2:179442049;179442048;179442047 |
Novex-2 | 14132 | 42619;42620;42621 | chr2:178577322;178577321;178577320 | chr2:179442049;179442048;179442047 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1196794512 | -1.078 | 0.09 | D | 0.711 | 0.325 | 0.52170519339 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
L/V | rs1196794512 | -1.078 | 0.09 | D | 0.711 | 0.325 | 0.52170519339 | gnomAD-4.0.0 | 1.5921E-06 | None | None | None | None | N | None | 5.66187E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8371 | likely_pathogenic | 0.8328 | pathogenic | -2.67 | Highly Destabilizing | 0.648 | D | 0.718 | prob.delet. | None | None | None | None | N |
L/C | 0.8153 | likely_pathogenic | 0.8188 | pathogenic | -1.943 | Destabilizing | 0.993 | D | 0.815 | deleterious | None | None | None | None | N |
L/D | 0.9993 | likely_pathogenic | 0.9993 | pathogenic | -3.387 | Highly Destabilizing | 0.929 | D | 0.909 | deleterious | None | None | None | None | N |
L/E | 0.9946 | likely_pathogenic | 0.9949 | pathogenic | -3.054 | Highly Destabilizing | 0.929 | D | 0.889 | deleterious | None | None | None | None | N |
L/F | 0.4871 | ambiguous | 0.4626 | ambiguous | -1.57 | Destabilizing | 0.83 | D | 0.785 | deleterious | N | 0.512810983 | None | None | N |
L/G | 0.9795 | likely_pathogenic | 0.98 | pathogenic | -3.306 | Highly Destabilizing | 0.929 | D | 0.889 | deleterious | None | None | None | None | N |
L/H | 0.9798 | likely_pathogenic | 0.9814 | pathogenic | -3.026 | Highly Destabilizing | 0.991 | D | 0.885 | deleterious | D | 0.559934953 | None | None | N |
L/I | 0.1434 | likely_benign | 0.1292 | benign | -0.761 | Destabilizing | 0.01 | N | 0.394 | neutral | N | 0.507517838 | None | None | N |
L/K | 0.9898 | likely_pathogenic | 0.9901 | pathogenic | -2.043 | Highly Destabilizing | 0.929 | D | 0.879 | deleterious | None | None | None | None | N |
L/M | 0.2422 | likely_benign | 0.2369 | benign | -0.944 | Destabilizing | 0.866 | D | 0.774 | deleterious | None | None | None | None | N |
L/N | 0.9931 | likely_pathogenic | 0.9945 | pathogenic | -2.758 | Highly Destabilizing | 0.976 | D | 0.911 | deleterious | None | None | None | None | N |
L/P | 0.9958 | likely_pathogenic | 0.9954 | pathogenic | -1.387 | Destabilizing | 0.968 | D | 0.909 | deleterious | D | 0.571455842 | None | None | N |
L/Q | 0.9702 | likely_pathogenic | 0.9743 | pathogenic | -2.393 | Highly Destabilizing | 0.993 | D | 0.9 | deleterious | None | None | None | None | N |
L/R | 0.98 | likely_pathogenic | 0.9793 | pathogenic | -2.128 | Highly Destabilizing | 0.908 | D | 0.898 | deleterious | D | 0.571455842 | None | None | N |
L/S | 0.986 | likely_pathogenic | 0.9869 | pathogenic | -3.358 | Highly Destabilizing | 0.929 | D | 0.874 | deleterious | None | None | None | None | N |
L/T | 0.9433 | likely_pathogenic | 0.9442 | pathogenic | -2.85 | Highly Destabilizing | 0.866 | D | 0.774 | deleterious | None | None | None | None | N |
L/V | 0.1696 | likely_benign | 0.1564 | benign | -1.387 | Destabilizing | 0.09 | N | 0.711 | prob.delet. | D | 0.5221166 | None | None | N |
L/W | 0.941 | likely_pathogenic | 0.9369 | pathogenic | -2.009 | Highly Destabilizing | 0.993 | D | 0.857 | deleterious | None | None | None | None | N |
L/Y | 0.9232 | likely_pathogenic | 0.9171 | pathogenic | -1.751 | Destabilizing | 0.929 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.