Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23012 | 69259;69260;69261 | chr2:178577301;178577300;178577299 | chr2:179442028;179442027;179442026 |
N2AB | 21371 | 64336;64337;64338 | chr2:178577301;178577300;178577299 | chr2:179442028;179442027;179442026 |
N2A | 20444 | 61555;61556;61557 | chr2:178577301;178577300;178577299 | chr2:179442028;179442027;179442026 |
N2B | 13947 | 42064;42065;42066 | chr2:178577301;178577300;178577299 | chr2:179442028;179442027;179442026 |
Novex-1 | 14072 | 42439;42440;42441 | chr2:178577301;178577300;178577299 | chr2:179442028;179442027;179442026 |
Novex-2 | 14139 | 42640;42641;42642 | chr2:178577301;178577300;178577299 | chr2:179442028;179442027;179442026 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.997 | N | 0.543 | 0.274 | 0.187945064343 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9589 | likely_pathogenic | 0.9245 | pathogenic | 0.06 | Stabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | I |
R/C | 0.7271 | likely_pathogenic | 0.5846 | pathogenic | -0.162 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | I |
R/D | 0.9911 | likely_pathogenic | 0.9842 | pathogenic | -0.18 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
R/E | 0.9138 | likely_pathogenic | 0.8788 | pathogenic | -0.126 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | I |
R/F | 0.9739 | likely_pathogenic | 0.9654 | pathogenic | -0.2 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
R/G | 0.937 | likely_pathogenic | 0.8761 | pathogenic | -0.108 | Destabilizing | 1.0 | D | 0.57 | neutral | N | 0.484534018 | None | None | I |
R/H | 0.5168 | ambiguous | 0.3871 | ambiguous | -0.592 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
R/I | 0.869 | likely_pathogenic | 0.8536 | pathogenic | 0.463 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.455451851 | None | None | I |
R/K | 0.3697 | ambiguous | 0.2908 | benign | -0.072 | Destabilizing | 0.997 | D | 0.543 | neutral | N | 0.49930589 | None | None | I |
R/L | 0.8256 | likely_pathogenic | 0.7714 | pathogenic | 0.463 | Stabilizing | 1.0 | D | 0.57 | neutral | None | None | None | None | I |
R/M | 0.9089 | likely_pathogenic | 0.8848 | pathogenic | 0.007 | Stabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
R/N | 0.9791 | likely_pathogenic | 0.9652 | pathogenic | 0.077 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
R/P | 0.9578 | likely_pathogenic | 0.9296 | pathogenic | 0.348 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
R/Q | 0.4469 | ambiguous | 0.3449 | ambiguous | 0.013 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
R/S | 0.9787 | likely_pathogenic | 0.9594 | pathogenic | -0.174 | Destabilizing | 1.0 | D | 0.625 | neutral | N | 0.453312257 | None | None | I |
R/T | 0.9459 | likely_pathogenic | 0.9112 | pathogenic | -0.001 | Destabilizing | 1.0 | D | 0.623 | neutral | N | 0.458085197 | None | None | I |
R/V | 0.9111 | likely_pathogenic | 0.8862 | pathogenic | 0.348 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
R/W | 0.7368 | likely_pathogenic | 0.6594 | pathogenic | -0.327 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
R/Y | 0.9324 | likely_pathogenic | 0.9023 | pathogenic | 0.085 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.