Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23014 | 69265;69266;69267 | chr2:178577295;178577294;178577293 | chr2:179442022;179442021;179442020 |
N2AB | 21373 | 64342;64343;64344 | chr2:178577295;178577294;178577293 | chr2:179442022;179442021;179442020 |
N2A | 20446 | 61561;61562;61563 | chr2:178577295;178577294;178577293 | chr2:179442022;179442021;179442020 |
N2B | 13949 | 42070;42071;42072 | chr2:178577295;178577294;178577293 | chr2:179442022;179442021;179442020 |
Novex-1 | 14074 | 42445;42446;42447 | chr2:178577295;178577294;178577293 | chr2:179442022;179442021;179442020 |
Novex-2 | 14141 | 42646;42647;42648 | chr2:178577295;178577294;178577293 | chr2:179442022;179442021;179442020 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs1394733017 | -0.895 | 0.978 | D | 0.691 | 0.885 | 0.679795130832 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
D/G | rs1394733017 | -0.895 | 0.978 | D | 0.691 | 0.885 | 0.679795130832 | gnomAD-4.0.0 | 1.59224E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85982E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7414 | likely_pathogenic | 0.7236 | pathogenic | 0.057 | Stabilizing | 0.989 | D | 0.812 | deleterious | D | 0.612994591 | None | None | N |
D/C | 0.8726 | likely_pathogenic | 0.8476 | pathogenic | 0.121 | Stabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
D/E | 0.5374 | ambiguous | 0.4883 | ambiguous | -0.567 | Destabilizing | 0.948 | D | 0.638 | neutral | D | 0.590424618 | None | None | N |
D/F | 0.9159 | likely_pathogenic | 0.893 | pathogenic | 0.769 | Stabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
D/G | 0.801 | likely_pathogenic | 0.7942 | pathogenic | -0.344 | Destabilizing | 0.978 | D | 0.691 | prob.neutral | D | 0.629215756 | None | None | N |
D/H | 0.5811 | likely_pathogenic | 0.501 | ambiguous | 0.645 | Stabilizing | 0.997 | D | 0.766 | deleterious | D | 0.54351664 | None | None | N |
D/I | 0.8833 | likely_pathogenic | 0.8777 | pathogenic | 1.125 | Stabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | N |
D/K | 0.9472 | likely_pathogenic | 0.9463 | pathogenic | 0.314 | Stabilizing | 0.983 | D | 0.775 | deleterious | None | None | None | None | N |
D/L | 0.8884 | likely_pathogenic | 0.8721 | pathogenic | 1.125 | Stabilizing | 0.998 | D | 0.85 | deleterious | None | None | None | None | N |
D/M | 0.9195 | likely_pathogenic | 0.9022 | pathogenic | 1.371 | Stabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
D/N | 0.2802 | likely_benign | 0.2481 | benign | -0.545 | Destabilizing | 0.198 | N | 0.321 | neutral | D | 0.578877106 | None | None | N |
D/P | 0.9957 | likely_pathogenic | 0.9948 | pathogenic | 0.797 | Stabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
D/Q | 0.8328 | likely_pathogenic | 0.7961 | pathogenic | -0.294 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
D/R | 0.964 | likely_pathogenic | 0.9614 | pathogenic | 0.497 | Stabilizing | 0.998 | D | 0.843 | deleterious | None | None | None | None | N |
D/S | 0.585 | likely_pathogenic | 0.5495 | ambiguous | -0.713 | Destabilizing | 0.983 | D | 0.638 | neutral | None | None | None | None | N |
D/T | 0.8299 | likely_pathogenic | 0.8119 | pathogenic | -0.345 | Destabilizing | 0.983 | D | 0.763 | deleterious | None | None | None | None | N |
D/V | 0.7708 | likely_pathogenic | 0.8532 | pathogenic | 0.797 | Stabilizing | 0.999 | D | 0.851 | deleterious | D | 0.645638726 | None | None | N |
D/W | 0.9846 | likely_pathogenic | 0.9811 | pathogenic | 0.971 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
D/Y | 0.5391 | ambiguous | 0.4828 | ambiguous | 1.073 | Stabilizing | 0.999 | D | 0.848 | deleterious | D | 0.61989881 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.