Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23030 | 69313;69314;69315 | chr2:178577247;178577246;178577245 | chr2:179441974;179441973;179441972 |
N2AB | 21389 | 64390;64391;64392 | chr2:178577247;178577246;178577245 | chr2:179441974;179441973;179441972 |
N2A | 20462 | 61609;61610;61611 | chr2:178577247;178577246;178577245 | chr2:179441974;179441973;179441972 |
N2B | 13965 | 42118;42119;42120 | chr2:178577247;178577246;178577245 | chr2:179441974;179441973;179441972 |
Novex-1 | 14090 | 42493;42494;42495 | chr2:178577247;178577246;178577245 | chr2:179441974;179441973;179441972 |
Novex-2 | 14157 | 42694;42695;42696 | chr2:178577247;178577246;178577245 | chr2:179441974;179441973;179441972 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1389259455 | None | 0.003 | N | 0.277 | 0.059 | 0.253726318573 | gnomAD-4.0.0 | 1.59271E-06 | None | None | None | None | N | None | 5.66251E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | rs1389259455 | -0.449 | 0.196 | N | 0.419 | 0.091 | 0.278968121808 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/M | rs1389259455 | -0.449 | 0.196 | N | 0.419 | 0.091 | 0.278968121808 | gnomAD-4.0.0 | 1.59271E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43316E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0726 | likely_benign | 0.069 | benign | -0.926 | Destabilizing | 0.001 | N | 0.208 | neutral | N | 0.48322537 | None | None | N |
V/C | 0.5425 | ambiguous | 0.5213 | ambiguous | -0.46 | Destabilizing | 0.245 | N | 0.435 | neutral | None | None | None | None | N |
V/D | 0.1295 | likely_benign | 0.0931 | benign | -1.018 | Destabilizing | None | N | 0.395 | neutral | None | None | None | None | N |
V/E | 0.0537 | likely_benign | 0.0504 | benign | -1.121 | Destabilizing | None | N | 0.273 | neutral | N | 0.399489265 | None | None | N |
V/F | 0.2108 | likely_benign | 0.1997 | benign | -1.049 | Destabilizing | 0.085 | N | 0.513 | neutral | None | None | None | None | N |
V/G | 0.1148 | likely_benign | 0.1043 | benign | -1.115 | Destabilizing | None | N | 0.394 | neutral | N | 0.508699817 | None | None | N |
V/H | 0.2901 | likely_benign | 0.2657 | benign | -0.786 | Destabilizing | 0.138 | N | 0.581 | neutral | None | None | None | None | N |
V/I | 0.0832 | likely_benign | 0.0794 | benign | -0.552 | Destabilizing | 0.018 | N | 0.353 | neutral | None | None | None | None | N |
V/K | 0.1027 | likely_benign | 0.097 | benign | -0.84 | Destabilizing | 0.004 | N | 0.372 | neutral | None | None | None | None | N |
V/L | 0.1487 | likely_benign | 0.1435 | benign | -0.552 | Destabilizing | 0.003 | N | 0.277 | neutral | N | 0.485804315 | None | None | N |
V/M | 0.0934 | likely_benign | 0.0934 | benign | -0.301 | Destabilizing | 0.196 | N | 0.419 | neutral | N | 0.513894993 | None | None | N |
V/N | 0.1154 | likely_benign | 0.097 | benign | -0.43 | Destabilizing | 0.004 | N | 0.372 | neutral | None | None | None | None | N |
V/P | 0.6384 | likely_pathogenic | 0.6321 | pathogenic | -0.642 | Destabilizing | 0.018 | N | 0.398 | neutral | None | None | None | None | N |
V/Q | 0.0794 | likely_benign | 0.0819 | benign | -0.728 | Destabilizing | None | N | 0.298 | neutral | None | None | None | None | N |
V/R | 0.13 | likely_benign | 0.1266 | benign | -0.227 | Destabilizing | 0.009 | N | 0.397 | neutral | None | None | None | None | N |
V/S | 0.078 | likely_benign | 0.0681 | benign | -0.742 | Destabilizing | None | N | 0.303 | neutral | None | None | None | None | N |
V/T | 0.0653 | likely_benign | 0.0625 | benign | -0.758 | Destabilizing | None | N | 0.119 | neutral | None | None | None | None | N |
V/W | 0.715 | likely_pathogenic | 0.6723 | pathogenic | -1.166 | Destabilizing | 0.497 | N | 0.511 | neutral | None | None | None | None | N |
V/Y | 0.399 | ambiguous | 0.3414 | ambiguous | -0.894 | Destabilizing | 0.085 | N | 0.492 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.