Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23036 | 69331;69332;69333 | chr2:178577229;178577228;178577227 | chr2:179441956;179441955;179441954 |
N2AB | 21395 | 64408;64409;64410 | chr2:178577229;178577228;178577227 | chr2:179441956;179441955;179441954 |
N2A | 20468 | 61627;61628;61629 | chr2:178577229;178577228;178577227 | chr2:179441956;179441955;179441954 |
N2B | 13971 | 42136;42137;42138 | chr2:178577229;178577228;178577227 | chr2:179441956;179441955;179441954 |
Novex-1 | 14096 | 42511;42512;42513 | chr2:178577229;178577228;178577227 | chr2:179441956;179441955;179441954 |
Novex-2 | 14163 | 42712;42713;42714 | chr2:178577229;178577228;178577227 | chr2:179441956;179441955;179441954 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.027 | D | 0.406 | 0.165 | 0.286848849266 | gnomAD-4.0.0 | 3.18532E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71997E-06 | 0 | 0 |
T/I | rs1056452429 | 0.095 | 0.317 | N | 0.443 | 0.216 | 0.40146981186 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1056452429 | 0.095 | 0.317 | N | 0.443 | 0.216 | 0.40146981186 | gnomAD-4.0.0 | 1.36897E-06 | None | None | None | None | N | None | 0 | 2.23774E-05 | None | 0 | 0 | None | 0 | 0 | 8.99649E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0894 | likely_benign | 0.0848 | benign | -0.814 | Destabilizing | 0.027 | N | 0.406 | neutral | D | 0.536041134 | None | None | N |
T/C | 0.3264 | likely_benign | 0.3204 | benign | -0.531 | Destabilizing | 0.824 | D | 0.436 | neutral | None | None | None | None | N |
T/D | 0.4105 | ambiguous | 0.3653 | ambiguous | 0.201 | Stabilizing | 0.081 | N | 0.421 | neutral | None | None | None | None | N |
T/E | 0.313 | likely_benign | 0.2646 | benign | 0.215 | Stabilizing | 0.081 | N | 0.421 | neutral | None | None | None | None | N |
T/F | 0.2402 | likely_benign | 0.2236 | benign | -0.841 | Destabilizing | 0.555 | D | 0.468 | neutral | None | None | None | None | N |
T/G | 0.2903 | likely_benign | 0.3228 | benign | -1.078 | Destabilizing | 0.081 | N | 0.455 | neutral | None | None | None | None | N |
T/H | 0.1893 | likely_benign | 0.1674 | benign | -1.303 | Destabilizing | 0.824 | D | 0.449 | neutral | None | None | None | None | N |
T/I | 0.1303 | likely_benign | 0.1138 | benign | -0.2 | Destabilizing | 0.317 | N | 0.443 | neutral | N | 0.515532576 | None | None | N |
T/K | 0.139 | likely_benign | 0.1205 | benign | -0.565 | Destabilizing | None | N | 0.155 | neutral | N | 0.469104066 | None | None | N |
T/L | 0.0902 | likely_benign | 0.0843 | benign | -0.2 | Destabilizing | 0.149 | N | 0.435 | neutral | None | None | None | None | N |
T/M | 0.0806 | likely_benign | 0.074 | benign | -0.051 | Destabilizing | 0.791 | D | 0.424 | neutral | None | None | None | None | N |
T/N | 0.1071 | likely_benign | 0.1024 | benign | -0.514 | Destabilizing | 0.081 | N | 0.345 | neutral | None | None | None | None | N |
T/P | 0.6615 | likely_pathogenic | 0.6648 | pathogenic | -0.372 | Destabilizing | 0.317 | N | 0.425 | neutral | D | 0.532869659 | None | None | N |
T/Q | 0.1837 | likely_benign | 0.1637 | benign | -0.631 | Destabilizing | 0.38 | N | 0.425 | neutral | None | None | None | None | N |
T/R | 0.1358 | likely_benign | 0.1163 | benign | -0.42 | Destabilizing | 0.062 | N | 0.399 | neutral | D | 0.535465131 | None | None | N |
T/S | 0.1106 | likely_benign | 0.1121 | benign | -0.874 | Destabilizing | None | N | 0.156 | neutral | N | 0.514665784 | None | None | N |
T/V | 0.1145 | likely_benign | 0.1009 | benign | -0.372 | Destabilizing | 0.149 | N | 0.348 | neutral | None | None | None | None | N |
T/W | 0.5425 | ambiguous | 0.5295 | ambiguous | -0.752 | Destabilizing | 0.935 | D | 0.544 | neutral | None | None | None | None | N |
T/Y | 0.2573 | likely_benign | 0.2429 | benign | -0.514 | Destabilizing | 0.555 | D | 0.467 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.