Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23040 | 69343;69344;69345 | chr2:178577217;178577216;178577215 | chr2:179441944;179441943;179441942 |
N2AB | 21399 | 64420;64421;64422 | chr2:178577217;178577216;178577215 | chr2:179441944;179441943;179441942 |
N2A | 20472 | 61639;61640;61641 | chr2:178577217;178577216;178577215 | chr2:179441944;179441943;179441942 |
N2B | 13975 | 42148;42149;42150 | chr2:178577217;178577216;178577215 | chr2:179441944;179441943;179441942 |
Novex-1 | 14100 | 42523;42524;42525 | chr2:178577217;178577216;178577215 | chr2:179441944;179441943;179441942 |
Novex-2 | 14167 | 42724;42725;42726 | chr2:178577217;178577216;178577215 | chr2:179441944;179441943;179441942 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.022 | N | 0.147 | 0.09 | 0.337621943819 | gnomAD-4.0.0 | 1.36897E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79932E-06 | 0 | 0 |
V/L | rs2046630648 | None | 0.595 | N | 0.423 | 0.146 | 0.336400405673 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.80769E-04 |
V/L | rs2046630648 | None | 0.595 | N | 0.423 | 0.146 | 0.336400405673 | gnomAD-4.0.0 | 1.86014E-06 | None | None | None | None | I | None | 1.33654E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47834E-07 | 0 | 1.60236E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3301 | likely_benign | 0.2783 | benign | -0.627 | Destabilizing | 0.877 | D | 0.377 | neutral | N | 0.503748918 | None | None | I |
V/C | 0.7468 | likely_pathogenic | 0.7403 | pathogenic | -0.707 | Destabilizing | 0.999 | D | 0.65 | prob.neutral | None | None | None | None | I |
V/D | 0.814 | likely_pathogenic | 0.7856 | pathogenic | 0.04 | Stabilizing | 0.995 | D | 0.825 | deleterious | None | None | None | None | I |
V/E | 0.5949 | likely_pathogenic | 0.5478 | ambiguous | -0.061 | Destabilizing | 0.994 | D | 0.8 | deleterious | N | 0.467124098 | None | None | I |
V/F | 0.3513 | ambiguous | 0.3397 | benign | -0.811 | Destabilizing | 0.971 | D | 0.659 | prob.neutral | None | None | None | None | I |
V/G | 0.5034 | ambiguous | 0.4703 | ambiguous | -0.768 | Destabilizing | 0.994 | D | 0.838 | deleterious | N | 0.490090199 | None | None | I |
V/H | 0.7673 | likely_pathogenic | 0.7435 | pathogenic | -0.305 | Destabilizing | 0.999 | D | 0.794 | deleterious | None | None | None | None | I |
V/I | 0.0768 | likely_benign | 0.0791 | benign | -0.401 | Destabilizing | 0.022 | N | 0.147 | neutral | N | 0.510888321 | None | None | I |
V/K | 0.4179 | ambiguous | 0.3288 | benign | -0.273 | Destabilizing | 0.985 | D | 0.802 | deleterious | None | None | None | None | I |
V/L | 0.3074 | likely_benign | 0.3089 | benign | -0.401 | Destabilizing | 0.595 | D | 0.423 | neutral | N | 0.509674812 | None | None | I |
V/M | 0.2005 | likely_benign | 0.1871 | benign | -0.365 | Destabilizing | 0.971 | D | 0.589 | neutral | None | None | None | None | I |
V/N | 0.5606 | ambiguous | 0.5054 | ambiguous | -0.054 | Destabilizing | 0.995 | D | 0.819 | deleterious | None | None | None | None | I |
V/P | 0.7884 | likely_pathogenic | 0.755 | pathogenic | -0.441 | Destabilizing | 0.995 | D | 0.811 | deleterious | None | None | None | None | I |
V/Q | 0.4852 | ambiguous | 0.4241 | ambiguous | -0.306 | Destabilizing | 0.995 | D | 0.796 | deleterious | None | None | None | None | I |
V/R | 0.3883 | ambiguous | 0.3236 | benign | 0.18 | Stabilizing | 0.995 | D | 0.813 | deleterious | None | None | None | None | I |
V/S | 0.4141 | ambiguous | 0.3582 | ambiguous | -0.527 | Destabilizing | 0.985 | D | 0.787 | deleterious | None | None | None | None | I |
V/T | 0.2428 | likely_benign | 0.2065 | benign | -0.524 | Destabilizing | 0.904 | D | 0.625 | neutral | None | None | None | None | I |
V/W | 0.9425 | likely_pathogenic | 0.9451 | pathogenic | -0.837 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | I |
V/Y | 0.7709 | likely_pathogenic | 0.7574 | pathogenic | -0.523 | Destabilizing | 0.995 | D | 0.633 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.