Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2305969400;69401;69402 chr2:178577160;178577159;178577158chr2:179441887;179441886;179441885
N2AB2141864477;64478;64479 chr2:178577160;178577159;178577158chr2:179441887;179441886;179441885
N2A2049161696;61697;61698 chr2:178577160;178577159;178577158chr2:179441887;179441886;179441885
N2B1399442205;42206;42207 chr2:178577160;178577159;178577158chr2:179441887;179441886;179441885
Novex-11411942580;42581;42582 chr2:178577160;178577159;178577158chr2:179441887;179441886;179441885
Novex-21418642781;42782;42783 chr2:178577160;178577159;178577158chr2:179441887;179441886;179441885
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-55
  • Domain position: 20
  • Structural Position: 22
  • Q(SASA): 0.1156
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs1394979272 -1.598 0.988 D 0.675 0.408 0.62500370566 gnomAD-2.1.1 4.03E-06 None None None None N None 6.46E-05 0 None 0 0 None 0 None 0 0 0
L/F rs1394979272 -1.598 0.988 D 0.675 0.408 0.62500370566 gnomAD-3.1.2 6.58E-06 None None None None N None 0 0 0 0 0 None 0 0 1.47E-05 0 0
L/F rs1394979272 -1.598 0.988 D 0.675 0.408 0.62500370566 gnomAD-4.0.0 2.56464E-06 None None None None N None 1.69314E-05 0 None 0 0 None 0 0 2.39498E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.8803 likely_pathogenic 0.8929 pathogenic -2.612 Highly Destabilizing 0.968 D 0.678 prob.neutral None None None None N
L/C 0.7932 likely_pathogenic 0.8075 pathogenic -1.942 Destabilizing 1.0 D 0.784 deleterious None None None None N
L/D 0.9997 likely_pathogenic 0.9997 pathogenic -3.337 Highly Destabilizing 0.998 D 0.893 deleterious None None None None N
L/E 0.9976 likely_pathogenic 0.9979 pathogenic -3.023 Highly Destabilizing 0.998 D 0.871 deleterious None None None None N
L/F 0.4952 ambiguous 0.4752 ambiguous -1.556 Destabilizing 0.988 D 0.675 prob.neutral D 0.526252478 None None N
L/G 0.989 likely_pathogenic 0.9907 pathogenic -3.231 Highly Destabilizing 0.995 D 0.861 deleterious None None None None N
L/H 0.9917 likely_pathogenic 0.9926 pathogenic -2.988 Highly Destabilizing 0.999 D 0.878 deleterious D 0.570160444 None None N
L/I 0.0844 likely_benign 0.0816 benign -0.769 Destabilizing 0.142 N 0.322 neutral N 0.475263714 None None N
L/K 0.9963 likely_pathogenic 0.9968 pathogenic -2.023 Highly Destabilizing 0.995 D 0.831 deleterious None None None None N
L/M 0.2556 likely_benign 0.2576 benign -0.938 Destabilizing 0.991 D 0.655 neutral None None None None N
L/N 0.9977 likely_pathogenic 0.9978 pathogenic -2.672 Highly Destabilizing 0.998 D 0.897 deleterious None None None None N
L/P 0.9971 likely_pathogenic 0.9975 pathogenic -1.371 Destabilizing 0.998 D 0.893 deleterious D 0.570160444 None None N
L/Q 0.9881 likely_pathogenic 0.9899 pathogenic -2.344 Highly Destabilizing 1.0 D 0.889 deleterious None None None None N
L/R 0.9907 likely_pathogenic 0.9921 pathogenic -2.039 Highly Destabilizing 0.998 D 0.87 deleterious D 0.570160444 None None N
L/S 0.9912 likely_pathogenic 0.992 pathogenic -3.277 Highly Destabilizing 0.995 D 0.834 deleterious None None None None N
L/T 0.9526 likely_pathogenic 0.9579 pathogenic -2.796 Highly Destabilizing 0.991 D 0.676 prob.neutral None None None None N
L/V 0.0833 likely_benign 0.0811 benign -1.371 Destabilizing 0.618 D 0.597 neutral N 0.520676532 None None N
L/W 0.9696 likely_pathogenic 0.9693 pathogenic -2.049 Highly Destabilizing 1.0 D 0.837 deleterious None None None None N
L/Y 0.9677 likely_pathogenic 0.9678 pathogenic -1.753 Destabilizing 0.995 D 0.765 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.