Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2307 | 7144;7145;7146 | chr2:178774345;178774344;178774343 | chr2:179639072;179639071;179639070 |
N2AB | 2307 | 7144;7145;7146 | chr2:178774345;178774344;178774343 | chr2:179639072;179639071;179639070 |
N2A | 2307 | 7144;7145;7146 | chr2:178774345;178774344;178774343 | chr2:179639072;179639071;179639070 |
N2B | 2261 | 7006;7007;7008 | chr2:178774345;178774344;178774343 | chr2:179639072;179639071;179639070 |
Novex-1 | 2261 | 7006;7007;7008 | chr2:178774345;178774344;178774343 | chr2:179639072;179639071;179639070 |
Novex-2 | 2261 | 7006;7007;7008 | chr2:178774345;178774344;178774343 | chr2:179639072;179639071;179639070 |
Novex-3 | 2307 | 7144;7145;7146 | chr2:178774345;178774344;178774343 | chr2:179639072;179639071;179639070 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs1327919896 | 0.076 | 0.001 | N | 0.148 | 0.276 | 0.307016933798 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 1.14784E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/T | rs1327919896 | 0.076 | 0.001 | N | 0.148 | 0.276 | 0.307016933798 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs1327919896 | 0.076 | 0.001 | N | 0.148 | 0.276 | 0.307016933798 | gnomAD-4.0.0 | 6.57047E-06 | None | None | None | None | N | None | 2.41301E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2223 | likely_benign | 0.2124 | benign | 0.001 | Stabilizing | 0.061 | N | 0.225 | neutral | None | None | None | None | N |
K/C | 0.5267 | ambiguous | 0.5245 | ambiguous | -0.409 | Destabilizing | 0.983 | D | 0.259 | neutral | None | None | None | None | N |
K/D | 0.4574 | ambiguous | 0.4255 | ambiguous | 0.03 | Stabilizing | 0.129 | N | 0.317 | neutral | None | None | None | None | N |
K/E | 0.1515 | likely_benign | 0.142 | benign | 0.055 | Stabilizing | 0.003 | N | 0.177 | neutral | N | 0.504011078 | None | None | N |
K/F | 0.5407 | ambiguous | 0.531 | ambiguous | -0.203 | Destabilizing | 0.716 | D | 0.324 | neutral | None | None | None | None | N |
K/G | 0.3786 | ambiguous | 0.3605 | ambiguous | -0.193 | Destabilizing | 0.129 | N | 0.297 | neutral | None | None | None | None | N |
K/H | 0.1924 | likely_benign | 0.1881 | benign | -0.336 | Destabilizing | 0.002 | N | 0.226 | neutral | None | None | None | None | N |
K/I | 0.1993 | likely_benign | 0.193 | benign | 0.436 | Stabilizing | 0.351 | N | 0.365 | neutral | N | 0.508824104 | None | None | N |
K/L | 0.2112 | likely_benign | 0.2055 | benign | 0.436 | Stabilizing | 0.129 | N | 0.325 | neutral | None | None | None | None | N |
K/M | 0.1709 | likely_benign | 0.1631 | benign | 0.015 | Stabilizing | 0.94 | D | 0.291 | neutral | None | None | None | None | N |
K/N | 0.2471 | likely_benign | 0.2345 | benign | 0.013 | Stabilizing | 0.101 | N | 0.213 | neutral | N | 0.501916228 | None | None | N |
K/P | 0.4191 | ambiguous | 0.416 | ambiguous | 0.318 | Stabilizing | 0.593 | D | 0.339 | neutral | None | None | None | None | N |
K/Q | 0.1009 | likely_benign | 0.1 | benign | -0.07 | Destabilizing | 0.351 | N | 0.254 | neutral | N | 0.503762505 | None | None | N |
K/R | 0.089 | likely_benign | 0.089 | benign | -0.072 | Destabilizing | 0.183 | N | 0.249 | neutral | N | 0.503041927 | None | None | N |
K/S | 0.2491 | likely_benign | 0.2373 | benign | -0.429 | Destabilizing | 0.001 | N | 0.138 | neutral | None | None | None | None | N |
K/T | 0.0964 | likely_benign | 0.0914 | benign | -0.252 | Destabilizing | 0.001 | N | 0.148 | neutral | N | 0.508867805 | None | None | N |
K/V | 0.1985 | likely_benign | 0.1927 | benign | 0.318 | Stabilizing | 0.129 | N | 0.35 | neutral | None | None | None | None | N |
K/W | 0.6761 | likely_pathogenic | 0.6737 | pathogenic | -0.276 | Destabilizing | 0.983 | D | 0.263 | neutral | None | None | None | None | N |
K/Y | 0.4583 | ambiguous | 0.45 | ambiguous | 0.086 | Stabilizing | 0.557 | D | 0.341 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.