Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23071 | 69436;69437;69438 | chr2:178577124;178577123;178577122 | chr2:179441851;179441850;179441849 |
N2AB | 21430 | 64513;64514;64515 | chr2:178577124;178577123;178577122 | chr2:179441851;179441850;179441849 |
N2A | 20503 | 61732;61733;61734 | chr2:178577124;178577123;178577122 | chr2:179441851;179441850;179441849 |
N2B | 14006 | 42241;42242;42243 | chr2:178577124;178577123;178577122 | chr2:179441851;179441850;179441849 |
Novex-1 | 14131 | 42616;42617;42618 | chr2:178577124;178577123;178577122 | chr2:179441851;179441850;179441849 |
Novex-2 | 14198 | 42817;42818;42819 | chr2:178577124;178577123;178577122 | chr2:179441851;179441850;179441849 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs367664195 | -0.138 | 0.822 | N | 0.531 | 0.331 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/S | None | None | 0.07 | N | 0.167 | 0.138 | 0.168933306366 | gnomAD-4.0.0 | 1.36879E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79929E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0697 | likely_benign | 0.0715 | benign | -0.46 | Destabilizing | 0.489 | N | 0.463 | neutral | N | 0.519791098 | None | None | I |
P/C | 0.4386 | ambiguous | 0.4254 | ambiguous | -0.56 | Destabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | I |
P/D | 0.3229 | likely_benign | 0.3429 | ambiguous | -0.214 | Destabilizing | 0.754 | D | 0.467 | neutral | None | None | None | None | I |
P/E | 0.2076 | likely_benign | 0.2133 | benign | -0.339 | Destabilizing | 0.019 | N | 0.279 | neutral | None | None | None | None | I |
P/F | 0.4598 | ambiguous | 0.4648 | ambiguous | -0.773 | Destabilizing | 0.993 | D | 0.599 | neutral | None | None | None | None | I |
P/G | 0.2923 | likely_benign | 0.3178 | benign | -0.582 | Destabilizing | 0.86 | D | 0.511 | neutral | None | None | None | None | I |
P/H | 0.1882 | likely_benign | 0.1895 | benign | -0.2 | Destabilizing | 0.994 | D | 0.571 | neutral | None | None | None | None | I |
P/I | 0.231 | likely_benign | 0.2347 | benign | -0.296 | Destabilizing | 0.978 | D | 0.609 | neutral | None | None | None | None | I |
P/K | 0.2404 | likely_benign | 0.2217 | benign | -0.303 | Destabilizing | 0.754 | D | 0.461 | neutral | None | None | None | None | I |
P/L | 0.1177 | likely_benign | 0.1142 | benign | -0.296 | Destabilizing | 0.822 | D | 0.531 | neutral | N | 0.490833074 | None | None | I |
P/M | 0.2338 | likely_benign | 0.2332 | benign | -0.227 | Destabilizing | 0.998 | D | 0.57 | neutral | None | None | None | None | I |
P/N | 0.2427 | likely_benign | 0.2508 | benign | -0.041 | Destabilizing | 0.86 | D | 0.495 | neutral | None | None | None | None | I |
P/Q | 0.139 | likely_benign | 0.1395 | benign | -0.315 | Destabilizing | 0.89 | D | 0.459 | neutral | N | 0.496060086 | None | None | I |
P/R | 0.1925 | likely_benign | 0.1915 | benign | 0.211 | Stabilizing | 0.942 | D | 0.552 | neutral | N | 0.486780922 | None | None | I |
P/S | 0.1149 | likely_benign | 0.1171 | benign | -0.415 | Destabilizing | 0.07 | N | 0.167 | neutral | N | 0.516558791 | None | None | I |
P/T | 0.0939 | likely_benign | 0.0941 | benign | -0.438 | Destabilizing | 0.698 | D | 0.463 | neutral | N | 0.471612729 | None | None | I |
P/V | 0.1477 | likely_benign | 0.1539 | benign | -0.316 | Destabilizing | 0.926 | D | 0.495 | neutral | None | None | None | None | I |
P/W | 0.6699 | likely_pathogenic | 0.6916 | pathogenic | -0.839 | Destabilizing | 0.998 | D | 0.703 | prob.neutral | None | None | None | None | I |
P/Y | 0.4279 | ambiguous | 0.4393 | ambiguous | -0.519 | Destabilizing | 0.993 | D | 0.6 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.