Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23078 | 69457;69458;69459 | chr2:178577103;178577102;178577101 | chr2:179441830;179441829;179441828 |
N2AB | 21437 | 64534;64535;64536 | chr2:178577103;178577102;178577101 | chr2:179441830;179441829;179441828 |
N2A | 20510 | 61753;61754;61755 | chr2:178577103;178577102;178577101 | chr2:179441830;179441829;179441828 |
N2B | 14013 | 42262;42263;42264 | chr2:178577103;178577102;178577101 | chr2:179441830;179441829;179441828 |
Novex-1 | 14138 | 42637;42638;42639 | chr2:178577103;178577102;178577101 | chr2:179441830;179441829;179441828 |
Novex-2 | 14205 | 42838;42839;42840 | chr2:178577103;178577102;178577101 | chr2:179441830;179441829;179441828 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs761442590 | -2.495 | 1.0 | D | 0.79 | 0.585 | None | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 1.29199E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs761442590 | -2.495 | 1.0 | D | 0.79 | 0.585 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs761442590 | -2.495 | 1.0 | D | 0.79 | 0.585 | None | gnomAD-4.0.0 | 5.12786E-06 | None | None | None | None | N | None | 6.77209E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.8902 | likely_pathogenic | 0.882 | pathogenic | -1.604 | Destabilizing | 0.999 | D | 0.746 | deleterious | D | 0.538483113 | None | None | N |
E/C | 0.985 | likely_pathogenic | 0.9859 | pathogenic | -0.643 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
E/D | 0.8414 | likely_pathogenic | 0.8293 | pathogenic | -1.618 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | N | 0.504503103 | None | None | N |
E/F | 0.9924 | likely_pathogenic | 0.9934 | pathogenic | -1.257 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
E/G | 0.9276 | likely_pathogenic | 0.9213 | pathogenic | -2.003 | Highly Destabilizing | 1.0 | D | 0.79 | deleterious | D | 0.54700549 | None | None | N |
E/H | 0.9563 | likely_pathogenic | 0.9606 | pathogenic | -1.075 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/I | 0.9795 | likely_pathogenic | 0.9808 | pathogenic | -0.45 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
E/K | 0.9388 | likely_pathogenic | 0.9341 | pathogenic | -1.349 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | D | 0.523226014 | None | None | N |
E/L | 0.9677 | likely_pathogenic | 0.9696 | pathogenic | -0.45 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
E/M | 0.9584 | likely_pathogenic | 0.9602 | pathogenic | 0.306 | Stabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
E/N | 0.9741 | likely_pathogenic | 0.971 | pathogenic | -1.587 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
E/P | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -0.822 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
E/Q | 0.4305 | ambiguous | 0.415 | ambiguous | -1.291 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.503877496 | None | None | N |
E/R | 0.9522 | likely_pathogenic | 0.9516 | pathogenic | -1.201 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
E/S | 0.8862 | likely_pathogenic | 0.8809 | pathogenic | -2.261 | Highly Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
E/T | 0.9509 | likely_pathogenic | 0.951 | pathogenic | -1.872 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
E/V | 0.9359 | likely_pathogenic | 0.9391 | pathogenic | -0.822 | Destabilizing | 1.0 | D | 0.787 | deleterious | D | 0.539243582 | None | None | N |
E/W | 0.9943 | likely_pathogenic | 0.9953 | pathogenic | -1.295 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
E/Y | 0.9861 | likely_pathogenic | 0.9877 | pathogenic | -1.038 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.