Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23080 | 69463;69464;69465 | chr2:178577097;178577096;178577095 | chr2:179441824;179441823;179441822 |
N2AB | 21439 | 64540;64541;64542 | chr2:178577097;178577096;178577095 | chr2:179441824;179441823;179441822 |
N2A | 20512 | 61759;61760;61761 | chr2:178577097;178577096;178577095 | chr2:179441824;179441823;179441822 |
N2B | 14015 | 42268;42269;42270 | chr2:178577097;178577096;178577095 | chr2:179441824;179441823;179441822 |
Novex-1 | 14140 | 42643;42644;42645 | chr2:178577097;178577096;178577095 | chr2:179441824;179441823;179441822 |
Novex-2 | 14207 | 42844;42845;42846 | chr2:178577097;178577096;178577095 | chr2:179441824;179441823;179441822 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs949990037 | -1.414 | 0.025 | N | 0.194 | 0.26 | 0.280181792013 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/K | rs949990037 | -1.414 | 0.025 | N | 0.194 | 0.26 | 0.280181792013 | gnomAD-4.0.0 | 1.59216E-06 | None | None | None | None | N | None | 0 | 2.28666E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9835 | likely_pathogenic | 0.9822 | pathogenic | -2.2 | Highly Destabilizing | 0.845 | D | 0.542 | neutral | None | None | None | None | N |
R/C | 0.6319 | likely_pathogenic | 0.6327 | pathogenic | -1.939 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
R/D | 0.9991 | likely_pathogenic | 0.9988 | pathogenic | -0.851 | Destabilizing | 0.975 | D | 0.773 | deleterious | None | None | None | None | N |
R/E | 0.9807 | likely_pathogenic | 0.9751 | pathogenic | -0.633 | Destabilizing | 0.845 | D | 0.455 | neutral | None | None | None | None | N |
R/F | 0.9951 | likely_pathogenic | 0.9947 | pathogenic | -1.415 | Destabilizing | 0.996 | D | 0.811 | deleterious | None | None | None | None | N |
R/G | 0.9713 | likely_pathogenic | 0.9711 | pathogenic | -2.54 | Highly Destabilizing | 0.892 | D | 0.683 | prob.neutral | N | 0.520823385 | None | None | N |
R/H | 0.827 | likely_pathogenic | 0.7943 | pathogenic | -2.23 | Highly Destabilizing | 0.987 | D | 0.613 | neutral | None | None | None | None | N |
R/I | 0.9833 | likely_pathogenic | 0.9831 | pathogenic | -1.203 | Destabilizing | 0.983 | D | 0.815 | deleterious | D | 0.527317845 | None | None | N |
R/K | 0.5558 | ambiguous | 0.4809 | ambiguous | -1.274 | Destabilizing | 0.025 | N | 0.194 | neutral | N | 0.513497056 | None | None | N |
R/L | 0.9591 | likely_pathogenic | 0.9563 | pathogenic | -1.203 | Destabilizing | 0.916 | D | 0.683 | prob.neutral | None | None | None | None | N |
R/M | 0.95 | likely_pathogenic | 0.9474 | pathogenic | -1.644 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
R/N | 0.9964 | likely_pathogenic | 0.9954 | pathogenic | -1.221 | Destabilizing | 0.975 | D | 0.577 | neutral | None | None | None | None | N |
R/P | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -1.526 | Destabilizing | 0.987 | D | 0.793 | deleterious | None | None | None | None | N |
R/Q | 0.5431 | ambiguous | 0.5028 | ambiguous | -1.162 | Destabilizing | 0.975 | D | 0.555 | neutral | None | None | None | None | N |
R/S | 0.9949 | likely_pathogenic | 0.9944 | pathogenic | -2.234 | Highly Destabilizing | 0.892 | D | 0.647 | neutral | N | 0.493752227 | None | None | N |
R/T | 0.987 | likely_pathogenic | 0.9857 | pathogenic | -1.803 | Destabilizing | 0.967 | D | 0.727 | prob.delet. | N | 0.511922615 | None | None | N |
R/V | 0.9779 | likely_pathogenic | 0.9777 | pathogenic | -1.526 | Destabilizing | 0.975 | D | 0.799 | deleterious | None | None | None | None | N |
R/W | 0.9351 | likely_pathogenic | 0.9355 | pathogenic | -0.832 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | N |
R/Y | 0.9785 | likely_pathogenic | 0.9769 | pathogenic | -0.741 | Destabilizing | 0.996 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.