Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23091 | 69496;69497;69498 | chr2:178577064;178577063;178577062 | chr2:179441791;179441790;179441789 |
N2AB | 21450 | 64573;64574;64575 | chr2:178577064;178577063;178577062 | chr2:179441791;179441790;179441789 |
N2A | 20523 | 61792;61793;61794 | chr2:178577064;178577063;178577062 | chr2:179441791;179441790;179441789 |
N2B | 14026 | 42301;42302;42303 | chr2:178577064;178577063;178577062 | chr2:179441791;179441790;179441789 |
Novex-1 | 14151 | 42676;42677;42678 | chr2:178577064;178577063;178577062 | chr2:179441791;179441790;179441789 |
Novex-2 | 14218 | 42877;42878;42879 | chr2:178577064;178577063;178577062 | chr2:179441791;179441790;179441789 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.295 | N | 0.433 | 0.365 | 0.539388553722 | gnomAD-4.0.0 | 1.59195E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02572E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.057 | likely_benign | 0.0554 | benign | -0.441 | Destabilizing | None | N | 0.129 | neutral | N | 0.431268036 | None | None | N |
S/C | 0.1092 | likely_benign | 0.1142 | benign | -0.377 | Destabilizing | 0.295 | N | 0.449 | neutral | D | 0.523178119 | None | None | N |
S/D | 0.3772 | ambiguous | 0.3237 | benign | -0.005 | Destabilizing | 0.072 | N | 0.391 | neutral | None | None | None | None | N |
S/E | 0.4548 | ambiguous | 0.4097 | ambiguous | 0.004 | Stabilizing | 0.072 | N | 0.361 | neutral | None | None | None | None | N |
S/F | 0.2772 | likely_benign | 0.2657 | benign | -0.607 | Destabilizing | 0.295 | N | 0.433 | neutral | N | 0.481803718 | None | None | N |
S/G | 0.0983 | likely_benign | 0.0961 | benign | -0.697 | Destabilizing | 0.016 | N | 0.295 | neutral | None | None | None | None | N |
S/H | 0.3533 | ambiguous | 0.3366 | benign | -1.126 | Destabilizing | 0.628 | D | 0.441 | neutral | None | None | None | None | N |
S/I | 0.269 | likely_benign | 0.249 | benign | 0.127 | Stabilizing | 0.016 | N | 0.379 | neutral | None | None | None | None | N |
S/K | 0.614 | likely_pathogenic | 0.564 | pathogenic | -0.598 | Destabilizing | 0.072 | N | 0.364 | neutral | None | None | None | None | N |
S/L | 0.1188 | likely_benign | 0.1209 | benign | 0.127 | Stabilizing | 0.016 | N | 0.39 | neutral | None | None | None | None | N |
S/M | 0.1758 | likely_benign | 0.1733 | benign | 0.118 | Stabilizing | 0.356 | N | 0.457 | neutral | None | None | None | None | N |
S/N | 0.1816 | likely_benign | 0.1707 | benign | -0.588 | Destabilizing | 0.136 | N | 0.454 | neutral | None | None | None | None | N |
S/P | 0.8924 | likely_pathogenic | 0.8864 | pathogenic | -0.027 | Destabilizing | 0.055 | N | 0.424 | neutral | N | 0.469219645 | None | None | N |
S/Q | 0.4328 | ambiguous | 0.3944 | ambiguous | -0.63 | Destabilizing | 0.356 | N | 0.465 | neutral | None | None | None | None | N |
S/R | 0.5884 | likely_pathogenic | 0.5526 | ambiguous | -0.548 | Destabilizing | 0.072 | N | 0.407 | neutral | None | None | None | None | N |
S/T | 0.0834 | likely_benign | 0.0827 | benign | -0.551 | Destabilizing | 0.012 | N | 0.367 | neutral | N | 0.458489136 | None | None | N |
S/V | 0.1903 | likely_benign | 0.1747 | benign | -0.027 | Destabilizing | None | N | 0.296 | neutral | None | None | None | None | N |
S/W | 0.3934 | ambiguous | 0.4129 | ambiguous | -0.68 | Destabilizing | 0.864 | D | 0.528 | neutral | None | None | None | None | N |
S/Y | 0.2523 | likely_benign | 0.2421 | benign | -0.369 | Destabilizing | 0.295 | N | 0.439 | neutral | N | 0.475328244 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.