Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23093 | 69502;69503;69504 | chr2:178577058;178577057;178577056 | chr2:179441785;179441784;179441783 |
N2AB | 21452 | 64579;64580;64581 | chr2:178577058;178577057;178577056 | chr2:179441785;179441784;179441783 |
N2A | 20525 | 61798;61799;61800 | chr2:178577058;178577057;178577056 | chr2:179441785;179441784;179441783 |
N2B | 14028 | 42307;42308;42309 | chr2:178577058;178577057;178577056 | chr2:179441785;179441784;179441783 |
Novex-1 | 14153 | 42682;42683;42684 | chr2:178577058;178577057;178577056 | chr2:179441785;179441784;179441783 |
Novex-2 | 14220 | 42883;42884;42885 | chr2:178577058;178577057;178577056 | chr2:179441785;179441784;179441783 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.001 | N | 0.108 | 0.149 | 0.132336055621 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
D/N | None | None | None | N | 0.104 | 0.075 | 0.119812018005 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
D/V | None | None | 0.491 | N | 0.39 | 0.248 | 0.477762074677 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1502 | likely_benign | 0.1328 | benign | -0.389 | Destabilizing | 0.166 | N | 0.332 | neutral | N | 0.468130126 | None | None | I |
D/C | 0.5273 | ambiguous | 0.4838 | ambiguous | -0.093 | Destabilizing | 0.991 | D | 0.332 | neutral | None | None | None | None | I |
D/E | 0.1163 | likely_benign | 0.1087 | benign | -0.352 | Destabilizing | 0.285 | N | 0.278 | neutral | N | 0.445695984 | None | None | I |
D/F | 0.5203 | ambiguous | 0.468 | ambiguous | -0.169 | Destabilizing | 0.901 | D | 0.357 | neutral | None | None | None | None | I |
D/G | 0.1219 | likely_benign | 0.1008 | benign | -0.636 | Destabilizing | 0.001 | N | 0.108 | neutral | N | 0.454835542 | None | None | I |
D/H | 0.209 | likely_benign | 0.2 | benign | -0.2 | Destabilizing | 0.873 | D | 0.341 | neutral | N | 0.472402582 | None | None | I |
D/I | 0.3132 | likely_benign | 0.2878 | benign | 0.23 | Stabilizing | 0.901 | D | 0.385 | neutral | None | None | None | None | I |
D/K | 0.2838 | likely_benign | 0.2571 | benign | 0.068 | Stabilizing | 0.561 | D | 0.338 | neutral | None | None | None | None | I |
D/L | 0.3679 | ambiguous | 0.3344 | benign | 0.23 | Stabilizing | 0.561 | D | 0.411 | neutral | None | None | None | None | I |
D/M | 0.4502 | ambiguous | 0.4196 | ambiguous | 0.417 | Stabilizing | 0.991 | D | 0.331 | neutral | None | None | None | None | I |
D/N | 0.0704 | likely_benign | 0.0696 | benign | -0.274 | Destabilizing | None | N | 0.104 | neutral | N | 0.439732804 | None | None | I |
D/P | 0.6581 | likely_pathogenic | 0.6029 | pathogenic | 0.047 | Stabilizing | 0.722 | D | 0.421 | neutral | None | None | None | None | I |
D/Q | 0.2387 | likely_benign | 0.2221 | benign | -0.206 | Destabilizing | 0.561 | D | 0.335 | neutral | None | None | None | None | I |
D/R | 0.3577 | ambiguous | 0.3253 | benign | 0.244 | Stabilizing | 0.561 | D | 0.375 | neutral | None | None | None | None | I |
D/S | 0.1147 | likely_benign | 0.1091 | benign | -0.415 | Destabilizing | 0.007 | N | 0.089 | neutral | None | None | None | None | I |
D/T | 0.1687 | likely_benign | 0.1604 | benign | -0.219 | Destabilizing | 0.209 | N | 0.325 | neutral | None | None | None | None | I |
D/V | 0.2001 | likely_benign | 0.1853 | benign | 0.047 | Stabilizing | 0.491 | N | 0.39 | neutral | N | 0.486889245 | None | None | I |
D/W | 0.8481 | likely_pathogenic | 0.819 | pathogenic | 0.003 | Stabilizing | 0.991 | D | 0.395 | neutral | None | None | None | None | I |
D/Y | 0.2238 | likely_benign | 0.2005 | benign | 0.068 | Stabilizing | 0.954 | D | 0.357 | neutral | N | 0.468801572 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.