Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23094 | 69505;69506;69507 | chr2:178577055;178577054;178577053 | chr2:179441782;179441781;179441780 |
N2AB | 21453 | 64582;64583;64584 | chr2:178577055;178577054;178577053 | chr2:179441782;179441781;179441780 |
N2A | 20526 | 61801;61802;61803 | chr2:178577055;178577054;178577053 | chr2:179441782;179441781;179441780 |
N2B | 14029 | 42310;42311;42312 | chr2:178577055;178577054;178577053 | chr2:179441782;179441781;179441780 |
Novex-1 | 14154 | 42685;42686;42687 | chr2:178577055;178577054;178577053 | chr2:179441782;179441781;179441780 |
Novex-2 | 14221 | 42886;42887;42888 | chr2:178577055;178577054;178577053 | chr2:179441782;179441781;179441780 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1462335969 | None | 0.684 | N | 0.559 | 0.289 | 0.578198000816 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 2.41E-05 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs1462335969 | None | 0.684 | N | 0.559 | 0.289 | 0.578198000816 | gnomAD-4.0.0 | 4.95875E-06 | None | None | None | None | N | None | 2.67144E-05 | 3.33522E-05 | None | 0 | 0 | None | 0 | 0 | 3.39105E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6207 | likely_pathogenic | 0.5888 | pathogenic | -2.419 | Highly Destabilizing | 0.004 | N | 0.329 | neutral | None | None | None | None | N |
I/C | 0.7196 | likely_pathogenic | 0.6882 | pathogenic | -1.802 | Destabilizing | 0.987 | D | 0.543 | neutral | None | None | None | None | N |
I/D | 0.935 | likely_pathogenic | 0.9175 | pathogenic | -2.161 | Highly Destabilizing | 0.953 | D | 0.619 | neutral | None | None | None | None | N |
I/E | 0.9015 | likely_pathogenic | 0.879 | pathogenic | -1.997 | Destabilizing | 0.91 | D | 0.636 | neutral | None | None | None | None | N |
I/F | 0.4198 | ambiguous | 0.3961 | ambiguous | -1.51 | Destabilizing | 0.939 | D | 0.631 | neutral | N | 0.471595821 | None | None | N |
I/G | 0.872 | likely_pathogenic | 0.8537 | pathogenic | -2.922 | Highly Destabilizing | 0.59 | D | 0.635 | neutral | None | None | None | None | N |
I/H | 0.8651 | likely_pathogenic | 0.8393 | pathogenic | -2.231 | Highly Destabilizing | 0.996 | D | 0.589 | neutral | None | None | None | None | N |
I/K | 0.8636 | likely_pathogenic | 0.8305 | pathogenic | -1.661 | Destabilizing | 0.91 | D | 0.635 | neutral | None | None | None | None | N |
I/L | 0.1247 | likely_benign | 0.1373 | benign | -1.0 | Destabilizing | 0.164 | N | 0.423 | neutral | N | 0.473861233 | None | None | N |
I/M | 0.1774 | likely_benign | 0.169 | benign | -0.961 | Destabilizing | 0.939 | D | 0.62 | neutral | N | 0.500933191 | None | None | N |
I/N | 0.6161 | likely_pathogenic | 0.5314 | ambiguous | -1.789 | Destabilizing | 0.939 | D | 0.634 | neutral | N | 0.462717823 | None | None | N |
I/P | 0.8972 | likely_pathogenic | 0.9015 | pathogenic | -1.45 | Destabilizing | 0.953 | D | 0.627 | neutral | None | None | None | None | N |
I/Q | 0.8205 | likely_pathogenic | 0.7927 | pathogenic | -1.756 | Destabilizing | 0.953 | D | 0.637 | neutral | None | None | None | None | N |
I/R | 0.8212 | likely_pathogenic | 0.7848 | pathogenic | -1.306 | Destabilizing | 0.953 | D | 0.633 | neutral | None | None | None | None | N |
I/S | 0.5924 | likely_pathogenic | 0.5293 | ambiguous | -2.579 | Highly Destabilizing | 0.521 | D | 0.605 | neutral | N | 0.515822499 | None | None | N |
I/T | 0.5245 | ambiguous | 0.4782 | ambiguous | -2.268 | Highly Destabilizing | 0.684 | D | 0.559 | neutral | N | 0.519268236 | None | None | N |
I/V | 0.1012 | likely_benign | 0.0995 | benign | -1.45 | Destabilizing | 0.004 | N | 0.164 | neutral | N | 0.39849947 | None | None | N |
I/W | 0.9507 | likely_pathogenic | 0.9497 | pathogenic | -1.748 | Destabilizing | 0.996 | D | 0.638 | neutral | None | None | None | None | N |
I/Y | 0.8512 | likely_pathogenic | 0.8195 | pathogenic | -1.496 | Destabilizing | 0.984 | D | 0.616 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.