Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23101 | 69526;69527;69528 | chr2:178577034;178577033;178577032 | chr2:179441761;179441760;179441759 |
N2AB | 21460 | 64603;64604;64605 | chr2:178577034;178577033;178577032 | chr2:179441761;179441760;179441759 |
N2A | 20533 | 61822;61823;61824 | chr2:178577034;178577033;178577032 | chr2:179441761;179441760;179441759 |
N2B | 14036 | 42331;42332;42333 | chr2:178577034;178577033;178577032 | chr2:179441761;179441760;179441759 |
Novex-1 | 14161 | 42706;42707;42708 | chr2:178577034;178577033;178577032 | chr2:179441761;179441760;179441759 |
Novex-2 | 14228 | 42907;42908;42909 | chr2:178577034;178577033;178577032 | chr2:179441761;179441760;179441759 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | None | N | 0.293 | 0.086 | 0.190952846119 | gnomAD-4.0.0 | 1.59188E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85963E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.463 | ambiguous | 0.4714 | ambiguous | -1.043 | Destabilizing | 0.909 | D | 0.714 | prob.delet. | None | None | None | None | N |
A/D | 0.9497 | likely_pathogenic | 0.9588 | pathogenic | -2.07 | Highly Destabilizing | 0.726 | D | 0.842 | deleterious | None | None | None | None | N |
A/E | 0.895 | likely_pathogenic | 0.9112 | pathogenic | -1.939 | Destabilizing | 0.667 | D | 0.817 | deleterious | N | 0.4721028 | None | None | N |
A/F | 0.6472 | likely_pathogenic | 0.6898 | pathogenic | -0.864 | Destabilizing | 0.567 | D | 0.839 | deleterious | None | None | None | None | N |
A/G | 0.4324 | ambiguous | 0.4221 | ambiguous | -1.548 | Destabilizing | 0.364 | N | 0.678 | prob.neutral | N | 0.486991051 | None | None | N |
A/H | 0.9373 | likely_pathogenic | 0.9489 | pathogenic | -1.974 | Destabilizing | 0.968 | D | 0.832 | deleterious | None | None | None | None | N |
A/I | 0.1636 | likely_benign | 0.169 | benign | 0.001 | Stabilizing | 0.06 | N | 0.74 | deleterious | None | None | None | None | N |
A/K | 0.9569 | likely_pathogenic | 0.9702 | pathogenic | -1.489 | Destabilizing | 0.726 | D | 0.809 | deleterious | None | None | None | None | N |
A/L | 0.2305 | likely_benign | 0.2605 | benign | 0.001 | Stabilizing | 0.072 | N | 0.735 | prob.delet. | None | None | None | None | N |
A/M | 0.3171 | likely_benign | 0.315 | benign | -0.028 | Destabilizing | 0.567 | D | 0.793 | deleterious | None | None | None | None | N |
A/N | 0.8565 | likely_pathogenic | 0.8691 | pathogenic | -1.508 | Destabilizing | 0.89 | D | 0.831 | deleterious | None | None | None | None | N |
A/P | 0.8216 | likely_pathogenic | 0.8658 | pathogenic | -0.327 | Destabilizing | 0.859 | D | 0.808 | deleterious | N | 0.475723651 | None | None | N |
A/Q | 0.8695 | likely_pathogenic | 0.8906 | pathogenic | -1.426 | Destabilizing | 0.89 | D | 0.787 | deleterious | None | None | None | None | N |
A/R | 0.9282 | likely_pathogenic | 0.9511 | pathogenic | -1.411 | Destabilizing | 0.726 | D | 0.802 | deleterious | None | None | None | None | N |
A/S | 0.236 | likely_benign | 0.2261 | benign | -1.902 | Destabilizing | 0.22 | N | 0.672 | neutral | N | 0.511534187 | None | None | N |
A/T | 0.1316 | likely_benign | 0.121 | benign | -1.647 | Destabilizing | 0.124 | N | 0.678 | prob.neutral | N | 0.499317038 | None | None | N |
A/V | 0.0682 | likely_benign | 0.0712 | benign | -0.327 | Destabilizing | None | N | 0.293 | neutral | N | 0.339733594 | None | None | N |
A/W | 0.9622 | likely_pathogenic | 0.971 | pathogenic | -1.536 | Destabilizing | 0.968 | D | 0.831 | deleterious | None | None | None | None | N |
A/Y | 0.8828 | likely_pathogenic | 0.907 | pathogenic | -1.002 | Destabilizing | 0.726 | D | 0.833 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.