Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23105 | 69538;69539;69540 | chr2:178577022;178577021;178577020 | chr2:179441749;179441748;179441747 |
N2AB | 21464 | 64615;64616;64617 | chr2:178577022;178577021;178577020 | chr2:179441749;179441748;179441747 |
N2A | 20537 | 61834;61835;61836 | chr2:178577022;178577021;178577020 | chr2:179441749;179441748;179441747 |
N2B | 14040 | 42343;42344;42345 | chr2:178577022;178577021;178577020 | chr2:179441749;179441748;179441747 |
Novex-1 | 14165 | 42718;42719;42720 | chr2:178577022;178577021;178577020 | chr2:179441749;179441748;179441747 |
Novex-2 | 14232 | 42919;42920;42921 | chr2:178577022;178577021;178577020 | chr2:179441749;179441748;179441747 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1430095779 | -1.181 | 0.967 | N | 0.532 | 0.378 | 0.629443713816 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9781 | likely_pathogenic | 0.9799 | pathogenic | -1.564 | Destabilizing | 0.916 | D | 0.433 | neutral | None | None | None | None | N |
I/C | 0.9885 | likely_pathogenic | 0.9884 | pathogenic | -0.861 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
I/D | 0.998 | likely_pathogenic | 0.9982 | pathogenic | -0.961 | Destabilizing | 0.996 | D | 0.722 | prob.delet. | None | None | None | None | N |
I/E | 0.9912 | likely_pathogenic | 0.9915 | pathogenic | -0.963 | Destabilizing | 0.987 | D | 0.731 | prob.delet. | None | None | None | None | N |
I/F | 0.7154 | likely_pathogenic | 0.6931 | pathogenic | -1.096 | Destabilizing | 0.967 | D | 0.544 | neutral | N | 0.52175118 | None | None | N |
I/G | 0.994 | likely_pathogenic | 0.9945 | pathogenic | -1.879 | Destabilizing | 0.987 | D | 0.732 | prob.delet. | None | None | None | None | N |
I/H | 0.9721 | likely_pathogenic | 0.9698 | pathogenic | -0.967 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | N |
I/K | 0.9694 | likely_pathogenic | 0.9698 | pathogenic | -1.006 | Destabilizing | 0.987 | D | 0.731 | prob.delet. | None | None | None | None | N |
I/L | 0.2346 | likely_benign | 0.2494 | benign | -0.779 | Destabilizing | 0.011 | N | 0.157 | neutral | N | 0.451504448 | None | None | N |
I/M | 0.4873 | ambiguous | 0.4999 | ambiguous | -0.582 | Destabilizing | 0.967 | D | 0.543 | neutral | N | 0.484611194 | None | None | N |
I/N | 0.9716 | likely_pathogenic | 0.9719 | pathogenic | -0.812 | Destabilizing | 0.994 | D | 0.725 | prob.delet. | N | 0.498892963 | None | None | N |
I/P | 0.9871 | likely_pathogenic | 0.9895 | pathogenic | -1.009 | Destabilizing | 0.996 | D | 0.728 | prob.delet. | None | None | None | None | N |
I/Q | 0.9594 | likely_pathogenic | 0.9578 | pathogenic | -0.996 | Destabilizing | 0.996 | D | 0.713 | prob.delet. | None | None | None | None | N |
I/R | 0.9277 | likely_pathogenic | 0.9314 | pathogenic | -0.364 | Destabilizing | 0.987 | D | 0.73 | prob.delet. | None | None | None | None | N |
I/S | 0.9693 | likely_pathogenic | 0.9703 | pathogenic | -1.416 | Destabilizing | 0.983 | D | 0.637 | neutral | N | 0.503394706 | None | None | N |
I/T | 0.9771 | likely_pathogenic | 0.9771 | pathogenic | -1.298 | Destabilizing | 0.967 | D | 0.532 | neutral | N | 0.495524584 | None | None | N |
I/V | 0.6459 | likely_pathogenic | 0.5875 | pathogenic | -1.009 | Destabilizing | 0.426 | N | 0.323 | neutral | N | 0.48579038 | None | None | N |
I/W | 0.9719 | likely_pathogenic | 0.9652 | pathogenic | -1.141 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/Y | 0.9319 | likely_pathogenic | 0.9283 | pathogenic | -0.93 | Destabilizing | 0.987 | D | 0.617 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.