Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23108 | 69547;69548;69549 | chr2:178577013;178577012;178577011 | chr2:179441740;179441739;179441738 |
N2AB | 21467 | 64624;64625;64626 | chr2:178577013;178577012;178577011 | chr2:179441740;179441739;179441738 |
N2A | 20540 | 61843;61844;61845 | chr2:178577013;178577012;178577011 | chr2:179441740;179441739;179441738 |
N2B | 14043 | 42352;42353;42354 | chr2:178577013;178577012;178577011 | chr2:179441740;179441739;179441738 |
Novex-1 | 14168 | 42727;42728;42729 | chr2:178577013;178577012;178577011 | chr2:179441740;179441739;179441738 |
Novex-2 | 14235 | 42928;42929;42930 | chr2:178577013;178577012;178577011 | chr2:179441740;179441739;179441738 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs147525123 | -0.345 | 0.067 | N | 0.319 | 0.077 | 0.112648838833 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
N/K | rs147525123 | -0.345 | 0.067 | N | 0.319 | 0.077 | 0.112648838833 | gnomAD-4.0.0 | 6.84321E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99607E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.8928 | likely_pathogenic | 0.8754 | pathogenic | -0.947 | Destabilizing | 0.938 | D | 0.581 | neutral | None | None | None | None | N |
N/C | 0.7081 | likely_pathogenic | 0.6831 | pathogenic | -0.083 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
N/D | 0.8647 | likely_pathogenic | 0.8745 | pathogenic | -0.713 | Destabilizing | 0.958 | D | 0.499 | neutral | N | 0.486826467 | None | None | N |
N/E | 0.9623 | likely_pathogenic | 0.9639 | pathogenic | -0.592 | Destabilizing | 0.938 | D | 0.509 | neutral | None | None | None | None | N |
N/F | 0.9755 | likely_pathogenic | 0.9654 | pathogenic | -0.546 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
N/G | 0.8429 | likely_pathogenic | 0.8272 | pathogenic | -1.312 | Destabilizing | 0.968 | D | 0.425 | neutral | None | None | None | None | N |
N/H | 0.4765 | ambiguous | 0.4485 | ambiguous | -0.964 | Destabilizing | 0.994 | D | 0.667 | neutral | N | 0.494911296 | None | None | N |
N/I | 0.921 | likely_pathogenic | 0.9176 | pathogenic | -0.003 | Destabilizing | 0.994 | D | 0.735 | prob.delet. | N | 0.477609755 | None | None | N |
N/K | 0.952 | likely_pathogenic | 0.9455 | pathogenic | -0.444 | Destabilizing | 0.067 | N | 0.319 | neutral | N | 0.487771893 | None | None | N |
N/L | 0.9001 | likely_pathogenic | 0.8641 | pathogenic | -0.003 | Destabilizing | 0.991 | D | 0.693 | prob.neutral | None | None | None | None | N |
N/M | 0.919 | likely_pathogenic | 0.8914 | pathogenic | 0.387 | Stabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
N/P | 0.9873 | likely_pathogenic | 0.9875 | pathogenic | -0.288 | Destabilizing | 0.995 | D | 0.666 | neutral | None | None | None | None | N |
N/Q | 0.9075 | likely_pathogenic | 0.8958 | pathogenic | -0.965 | Destabilizing | 0.991 | D | 0.667 | neutral | None | None | None | None | N |
N/R | 0.9255 | likely_pathogenic | 0.9164 | pathogenic | -0.493 | Destabilizing | 0.982 | D | 0.577 | neutral | None | None | None | None | N |
N/S | 0.3279 | likely_benign | 0.3252 | benign | -1.083 | Destabilizing | 0.958 | D | 0.411 | neutral | N | 0.485192947 | None | None | N |
N/T | 0.8092 | likely_pathogenic | 0.8018 | pathogenic | -0.77 | Destabilizing | 0.958 | D | 0.558 | neutral | N | 0.431526247 | None | None | N |
N/V | 0.903 | likely_pathogenic | 0.8917 | pathogenic | -0.288 | Destabilizing | 0.991 | D | 0.715 | prob.delet. | None | None | None | None | N |
N/W | 0.9858 | likely_pathogenic | 0.9815 | pathogenic | -0.314 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
N/Y | 0.7754 | likely_pathogenic | 0.744 | pathogenic | -0.119 | Destabilizing | 0.998 | D | 0.712 | prob.delet. | N | 0.510210641 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.