Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2311 | 7156;7157;7158 | chr2:178774333;178774332;178774331 | chr2:179639060;179639059;179639058 |
N2AB | 2311 | 7156;7157;7158 | chr2:178774333;178774332;178774331 | chr2:179639060;179639059;179639058 |
N2A | 2311 | 7156;7157;7158 | chr2:178774333;178774332;178774331 | chr2:179639060;179639059;179639058 |
N2B | 2265 | 7018;7019;7020 | chr2:178774333;178774332;178774331 | chr2:179639060;179639059;179639058 |
Novex-1 | 2265 | 7018;7019;7020 | chr2:178774333;178774332;178774331 | chr2:179639060;179639059;179639058 |
Novex-2 | 2265 | 7018;7019;7020 | chr2:178774333;178774332;178774331 | chr2:179639060;179639059;179639058 |
Novex-3 | 2311 | 7156;7157;7158 | chr2:178774333;178774332;178774331 | chr2:179639060;179639059;179639058 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 1.0 | N | 0.699 | 0.246 | 0.0986583533028 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9215 | likely_pathogenic | 0.9291 | pathogenic | -0.67 | Destabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | N |
K/C | 0.9552 | likely_pathogenic | 0.961 | pathogenic | -0.554 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
K/D | 0.9332 | likely_pathogenic | 0.9394 | pathogenic | -0.206 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
K/E | 0.8022 | likely_pathogenic | 0.8222 | pathogenic | -0.091 | Destabilizing | 0.999 | D | 0.479 | neutral | N | 0.456190829 | None | None | N |
K/F | 0.9721 | likely_pathogenic | 0.9758 | pathogenic | -0.383 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/G | 0.9512 | likely_pathogenic | 0.9569 | pathogenic | -1.044 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
K/H | 0.6731 | likely_pathogenic | 0.6817 | pathogenic | -1.447 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
K/I | 0.7774 | likely_pathogenic | 0.8012 | pathogenic | 0.302 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | N | 0.450174381 | None | None | N |
K/L | 0.8019 | likely_pathogenic | 0.8132 | pathogenic | 0.302 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
K/M | 0.7001 | likely_pathogenic | 0.7203 | pathogenic | 0.26 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
K/N | 0.8041 | likely_pathogenic | 0.8154 | pathogenic | -0.555 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.455012854 | None | None | N |
K/P | 0.9633 | likely_pathogenic | 0.9691 | pathogenic | 0.008 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
K/Q | 0.5561 | ambiguous | 0.5744 | pathogenic | -0.599 | Destabilizing | 1.0 | D | 0.673 | neutral | N | 0.450174381 | None | None | N |
K/R | 0.1437 | likely_benign | 0.1451 | benign | -0.724 | Destabilizing | 0.999 | D | 0.493 | neutral | N | 0.362883062 | None | None | N |
K/S | 0.913 | likely_pathogenic | 0.9211 | pathogenic | -1.199 | Destabilizing | 0.999 | D | 0.582 | neutral | None | None | None | None | N |
K/T | 0.6912 | likely_pathogenic | 0.7161 | pathogenic | -0.871 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.456848273 | None | None | N |
K/V | 0.8049 | likely_pathogenic | 0.8253 | pathogenic | 0.008 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
K/W | 0.9628 | likely_pathogenic | 0.9684 | pathogenic | -0.273 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/Y | 0.921 | likely_pathogenic | 0.9295 | pathogenic | 0.015 | Stabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.