Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23114 | 69565;69566;69567 | chr2:178576995;178576994;178576993 | chr2:179441722;179441721;179441720 |
N2AB | 21473 | 64642;64643;64644 | chr2:178576995;178576994;178576993 | chr2:179441722;179441721;179441720 |
N2A | 20546 | 61861;61862;61863 | chr2:178576995;178576994;178576993 | chr2:179441722;179441721;179441720 |
N2B | 14049 | 42370;42371;42372 | chr2:178576995;178576994;178576993 | chr2:179441722;179441721;179441720 |
Novex-1 | 14174 | 42745;42746;42747 | chr2:178576995;178576994;178576993 | chr2:179441722;179441721;179441720 |
Novex-2 | 14241 | 42946;42947;42948 | chr2:178576995;178576994;178576993 | chr2:179441722;179441721;179441720 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.983 | D | 0.901 | 0.842 | 0.924821572837 | gnomAD-4.0.0 | 1.36863E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79922E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8355 | likely_pathogenic | 0.8082 | pathogenic | -2.686 | Highly Destabilizing | 0.099 | N | 0.348 | neutral | D | 0.564823251 | None | None | N |
V/C | 0.9543 | likely_pathogenic | 0.9432 | pathogenic | -2.143 | Highly Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
V/D | 0.9975 | likely_pathogenic | 0.9982 | pathogenic | -3.553 | Highly Destabilizing | 0.983 | D | 0.901 | deleterious | D | 0.657575589 | None | None | N |
V/E | 0.9936 | likely_pathogenic | 0.9945 | pathogenic | -3.254 | Highly Destabilizing | 0.987 | D | 0.848 | deleterious | None | None | None | None | N |
V/F | 0.8781 | likely_pathogenic | 0.8367 | pathogenic | -1.466 | Destabilizing | 0.967 | D | 0.749 | deleterious | D | 0.587535862 | None | None | N |
V/G | 0.9156 | likely_pathogenic | 0.9146 | pathogenic | -3.263 | Highly Destabilizing | 0.967 | D | 0.834 | deleterious | D | 0.657575589 | None | None | N |
V/H | 0.9978 | likely_pathogenic | 0.9979 | pathogenic | -2.979 | Highly Destabilizing | 0.999 | D | 0.882 | deleterious | None | None | None | None | N |
V/I | 0.0816 | likely_benign | 0.0762 | benign | -1.0 | Destabilizing | 0.025 | N | 0.295 | neutral | N | 0.521807974 | None | None | N |
V/K | 0.9945 | likely_pathogenic | 0.9953 | pathogenic | -2.181 | Highly Destabilizing | 0.987 | D | 0.854 | deleterious | None | None | None | None | N |
V/L | 0.6311 | likely_pathogenic | 0.5518 | ambiguous | -1.0 | Destabilizing | 0.369 | N | 0.551 | neutral | D | 0.533446453 | None | None | N |
V/M | 0.7511 | likely_pathogenic | 0.6902 | pathogenic | -1.277 | Destabilizing | 0.975 | D | 0.671 | neutral | None | None | None | None | N |
V/N | 0.9911 | likely_pathogenic | 0.9918 | pathogenic | -2.789 | Highly Destabilizing | 0.996 | D | 0.912 | deleterious | None | None | None | None | N |
V/P | 0.9935 | likely_pathogenic | 0.9923 | pathogenic | -1.546 | Destabilizing | 0.987 | D | 0.872 | deleterious | None | None | None | None | N |
V/Q | 0.9925 | likely_pathogenic | 0.9928 | pathogenic | -2.479 | Highly Destabilizing | 0.996 | D | 0.896 | deleterious | None | None | None | None | N |
V/R | 0.9893 | likely_pathogenic | 0.9908 | pathogenic | -2.118 | Highly Destabilizing | 0.987 | D | 0.909 | deleterious | None | None | None | None | N |
V/S | 0.9658 | likely_pathogenic | 0.9633 | pathogenic | -3.319 | Highly Destabilizing | 0.95 | D | 0.805 | deleterious | None | None | None | None | N |
V/T | 0.9148 | likely_pathogenic | 0.901 | pathogenic | -2.876 | Highly Destabilizing | 0.916 | D | 0.606 | neutral | None | None | None | None | N |
V/W | 0.9983 | likely_pathogenic | 0.9978 | pathogenic | -2.02 | Highly Destabilizing | 0.999 | D | 0.852 | deleterious | None | None | None | None | N |
V/Y | 0.989 | likely_pathogenic | 0.987 | pathogenic | -1.774 | Destabilizing | 0.987 | D | 0.751 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.