Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23120 | 69583;69584;69585 | chr2:178576977;178576976;178576975 | chr2:179441704;179441703;179441702 |
N2AB | 21479 | 64660;64661;64662 | chr2:178576977;178576976;178576975 | chr2:179441704;179441703;179441702 |
N2A | 20552 | 61879;61880;61881 | chr2:178576977;178576976;178576975 | chr2:179441704;179441703;179441702 |
N2B | 14055 | 42388;42389;42390 | chr2:178576977;178576976;178576975 | chr2:179441704;179441703;179441702 |
Novex-1 | 14180 | 42763;42764;42765 | chr2:178576977;178576976;178576975 | chr2:179441704;179441703;179441702 |
Novex-2 | 14247 | 42964;42965;42966 | chr2:178576977;178576976;178576975 | chr2:179441704;179441703;179441702 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1271048199 | None | 1.0 | N | 0.788 | 0.299 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/C | rs1271048199 | None | 1.0 | N | 0.788 | 0.299 | None | gnomAD-4.0.0 | 3.04497E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.61489E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.6676 | likely_pathogenic | 0.6915 | pathogenic | -0.605 | Destabilizing | 0.991 | D | 0.653 | neutral | None | None | None | None | I |
Y/C | 0.1505 | likely_benign | 0.1358 | benign | 0.312 | Stabilizing | 1.0 | D | 0.788 | deleterious | N | 0.470038885 | None | None | I |
Y/D | 0.7357 | likely_pathogenic | 0.801 | pathogenic | 0.803 | Stabilizing | 0.999 | D | 0.754 | deleterious | N | 0.493014531 | None | None | I |
Y/E | 0.8788 | likely_pathogenic | 0.9021 | pathogenic | 0.778 | Stabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | I |
Y/F | 0.0654 | likely_benign | 0.0565 | benign | -0.347 | Destabilizing | 0.117 | N | 0.408 | neutral | N | 0.49419922 | None | None | I |
Y/G | 0.7331 | likely_pathogenic | 0.7779 | pathogenic | -0.796 | Destabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | I |
Y/H | 0.1933 | likely_benign | 0.2247 | benign | 0.186 | Stabilizing | 0.999 | D | 0.654 | neutral | N | 0.475354803 | None | None | I |
Y/I | 0.4505 | ambiguous | 0.4373 | ambiguous | -0.123 | Destabilizing | 0.99 | D | 0.657 | neutral | None | None | None | None | I |
Y/K | 0.8174 | likely_pathogenic | 0.8746 | pathogenic | 0.332 | Stabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | I |
Y/L | 0.5715 | likely_pathogenic | 0.575 | pathogenic | -0.123 | Destabilizing | 0.966 | D | 0.622 | neutral | None | None | None | None | I |
Y/M | 0.6292 | likely_pathogenic | 0.6123 | pathogenic | 0.041 | Stabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | I |
Y/N | 0.4025 | ambiguous | 0.4375 | ambiguous | 0.217 | Stabilizing | 0.999 | D | 0.754 | deleterious | N | 0.474340845 | None | None | I |
Y/P | 0.9722 | likely_pathogenic | 0.9772 | pathogenic | -0.264 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | I |
Y/Q | 0.6869 | likely_pathogenic | 0.7408 | pathogenic | 0.23 | Stabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
Y/R | 0.6458 | likely_pathogenic | 0.737 | pathogenic | 0.576 | Stabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | I |
Y/S | 0.4232 | ambiguous | 0.4722 | ambiguous | -0.18 | Destabilizing | 0.997 | D | 0.719 | prob.delet. | N | 0.512726265 | None | None | I |
Y/T | 0.6913 | likely_pathogenic | 0.7108 | pathogenic | -0.111 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | I |
Y/V | 0.4087 | ambiguous | 0.4015 | ambiguous | -0.264 | Destabilizing | 0.983 | D | 0.661 | neutral | None | None | None | None | I |
Y/W | 0.4147 | ambiguous | 0.4131 | ambiguous | -0.491 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.