Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23124 | 69595;69596;69597 | chr2:178576965;178576964;178576963 | chr2:179441692;179441691;179441690 |
N2AB | 21483 | 64672;64673;64674 | chr2:178576965;178576964;178576963 | chr2:179441692;179441691;179441690 |
N2A | 20556 | 61891;61892;61893 | chr2:178576965;178576964;178576963 | chr2:179441692;179441691;179441690 |
N2B | 14059 | 42400;42401;42402 | chr2:178576965;178576964;178576963 | chr2:179441692;179441691;179441690 |
Novex-1 | 14184 | 42775;42776;42777 | chr2:178576965;178576964;178576963 | chr2:179441692;179441691;179441690 |
Novex-2 | 14251 | 42976;42977;42978 | chr2:178576965;178576964;178576963 | chr2:179441692;179441691;179441690 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.904 | N | 0.623 | 0.218 | 0.314716216878 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1877 | likely_benign | 0.1612 | benign | -0.302 | Destabilizing | 0.822 | D | 0.612 | neutral | N | 0.483218842 | None | None | I |
E/C | 0.8483 | likely_pathogenic | 0.794 | pathogenic | -0.173 | Destabilizing | 0.998 | D | 0.794 | deleterious | None | None | None | None | I |
E/D | 0.0972 | likely_benign | 0.0833 | benign | -0.361 | Destabilizing | 0.002 | N | 0.137 | neutral | N | 0.47844312 | None | None | I |
E/F | 0.7482 | likely_pathogenic | 0.6879 | pathogenic | -0.116 | Destabilizing | 0.993 | D | 0.731 | prob.delet. | None | None | None | None | I |
E/G | 0.2499 | likely_benign | 0.2263 | benign | -0.491 | Destabilizing | 0.822 | D | 0.601 | neutral | N | 0.499499445 | None | None | I |
E/H | 0.5636 | ambiguous | 0.5207 | ambiguous | 0.272 | Stabilizing | 0.993 | D | 0.563 | neutral | None | None | None | None | I |
E/I | 0.3244 | likely_benign | 0.254 | benign | 0.158 | Stabilizing | 0.978 | D | 0.711 | prob.delet. | None | None | None | None | I |
E/K | 0.206 | likely_benign | 0.1868 | benign | 0.349 | Stabilizing | 0.822 | D | 0.607 | neutral | N | 0.51913495 | None | None | I |
E/L | 0.3768 | ambiguous | 0.2982 | benign | 0.158 | Stabilizing | 0.978 | D | 0.669 | neutral | None | None | None | None | I |
E/M | 0.4556 | ambiguous | 0.3762 | ambiguous | 0.109 | Stabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | I |
E/N | 0.2622 | likely_benign | 0.2201 | benign | -0.056 | Destabilizing | 0.754 | D | 0.605 | neutral | None | None | None | None | I |
E/P | 0.3849 | ambiguous | 0.3449 | ambiguous | 0.025 | Stabilizing | 0.978 | D | 0.636 | neutral | None | None | None | None | I |
E/Q | 0.175 | likely_benign | 0.1582 | benign | -0.014 | Destabilizing | 0.904 | D | 0.623 | neutral | N | 0.467836839 | None | None | I |
E/R | 0.365 | ambiguous | 0.344 | ambiguous | 0.623 | Stabilizing | 0.978 | D | 0.593 | neutral | None | None | None | None | I |
E/S | 0.235 | likely_benign | 0.1995 | benign | -0.198 | Destabilizing | 0.86 | D | 0.57 | neutral | None | None | None | None | I |
E/T | 0.2771 | likely_benign | 0.2229 | benign | -0.036 | Destabilizing | 0.86 | D | 0.649 | neutral | None | None | None | None | I |
E/V | 0.2102 | likely_benign | 0.1655 | benign | 0.025 | Stabilizing | 0.97 | D | 0.6 | neutral | N | 0.517038794 | None | None | I |
E/W | 0.923 | likely_pathogenic | 0.9066 | pathogenic | 0.046 | Stabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | I |
E/Y | 0.6237 | likely_pathogenic | 0.5671 | pathogenic | 0.133 | Stabilizing | 0.993 | D | 0.716 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.