Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23125 | 69598;69599;69600 | chr2:178576962;178576961;178576960 | chr2:179441689;179441688;179441687 |
N2AB | 21484 | 64675;64676;64677 | chr2:178576962;178576961;178576960 | chr2:179441689;179441688;179441687 |
N2A | 20557 | 61894;61895;61896 | chr2:178576962;178576961;178576960 | chr2:179441689;179441688;179441687 |
N2B | 14060 | 42403;42404;42405 | chr2:178576962;178576961;178576960 | chr2:179441689;179441688;179441687 |
Novex-1 | 14185 | 42778;42779;42780 | chr2:178576962;178576961;178576960 | chr2:179441689;179441688;179441687 |
Novex-2 | 14252 | 42979;42980;42981 | chr2:178576962;178576961;178576960 | chr2:179441689;179441688;179441687 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.159 | N | 0.293 | 0.37 | 0.260735089382 | gnomAD-4.0.0 | 1.59197E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43308E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0695 | likely_benign | 0.0663 | benign | -1.561 | Destabilizing | 0.704 | D | 0.511 | neutral | N | 0.481671452 | None | None | I |
P/C | 0.4854 | ambiguous | 0.4345 | ambiguous | -0.952 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | I |
P/D | 0.7726 | likely_pathogenic | 0.7472 | pathogenic | -1.453 | Destabilizing | 0.939 | D | 0.521 | neutral | None | None | None | None | I |
P/E | 0.628 | likely_pathogenic | 0.6001 | pathogenic | -1.474 | Destabilizing | 0.939 | D | 0.523 | neutral | None | None | None | None | I |
P/F | 0.516 | ambiguous | 0.4862 | ambiguous | -1.217 | Destabilizing | 0.1 | N | 0.552 | neutral | None | None | None | None | I |
P/G | 0.3928 | ambiguous | 0.3342 | benign | -1.858 | Destabilizing | 0.939 | D | 0.527 | neutral | None | None | None | None | I |
P/H | 0.3856 | ambiguous | 0.3682 | ambiguous | -1.331 | Destabilizing | 0.999 | D | 0.634 | neutral | D | 0.53669546 | None | None | I |
P/I | 0.4902 | ambiguous | 0.5119 | ambiguous | -0.849 | Destabilizing | 0.884 | D | 0.592 | neutral | None | None | None | None | I |
P/K | 0.7961 | likely_pathogenic | 0.7605 | pathogenic | -1.294 | Destabilizing | 0.939 | D | 0.521 | neutral | None | None | None | None | I |
P/L | 0.3049 | likely_benign | 0.3272 | benign | -0.849 | Destabilizing | 0.704 | D | 0.533 | neutral | D | 0.522639675 | None | None | I |
P/M | 0.4139 | ambiguous | 0.4159 | ambiguous | -0.607 | Destabilizing | 0.991 | D | 0.641 | neutral | None | None | None | None | I |
P/N | 0.5995 | likely_pathogenic | 0.5777 | pathogenic | -1.008 | Destabilizing | 0.982 | D | 0.618 | neutral | None | None | None | None | I |
P/Q | 0.4227 | ambiguous | 0.406 | ambiguous | -1.235 | Destabilizing | 0.991 | D | 0.577 | neutral | None | None | None | None | I |
P/R | 0.6595 | likely_pathogenic | 0.6438 | pathogenic | -0.691 | Destabilizing | 0.988 | D | 0.621 | neutral | N | 0.520539761 | None | None | I |
P/S | 0.1585 | likely_benign | 0.1523 | benign | -1.497 | Destabilizing | 0.159 | N | 0.293 | neutral | N | 0.517070268 | None | None | I |
P/T | 0.1753 | likely_benign | 0.18 | benign | -1.42 | Destabilizing | 0.852 | D | 0.497 | neutral | N | 0.517830737 | None | None | I |
P/V | 0.3167 | likely_benign | 0.3256 | benign | -1.053 | Destabilizing | 0.17 | N | 0.521 | neutral | None | None | None | None | I |
P/W | 0.7085 | likely_pathogenic | 0.6872 | pathogenic | -1.357 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | I |
P/Y | 0.5185 | ambiguous | 0.4924 | ambiguous | -1.114 | Destabilizing | 0.964 | D | 0.653 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.