Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23127 | 69604;69605;69606 | chr2:178576956;178576955;178576954 | chr2:179441683;179441682;179441681 |
N2AB | 21486 | 64681;64682;64683 | chr2:178576956;178576955;178576954 | chr2:179441683;179441682;179441681 |
N2A | 20559 | 61900;61901;61902 | chr2:178576956;178576955;178576954 | chr2:179441683;179441682;179441681 |
N2B | 14062 | 42409;42410;42411 | chr2:178576956;178576955;178576954 | chr2:179441683;179441682;179441681 |
Novex-1 | 14187 | 42784;42785;42786 | chr2:178576956;178576955;178576954 | chr2:179441683;179441682;179441681 |
Novex-2 | 14254 | 42985;42986;42987 | chr2:178576956;178576955;178576954 | chr2:179441683;179441682;179441681 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | rs953796748 | -0.186 | 0.002 | N | 0.22 | 0.097 | 0.0954503805726 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66223E-04 |
Q/E | rs953796748 | -0.186 | 0.002 | N | 0.22 | 0.097 | 0.0954503805726 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Q/E | rs953796748 | -0.186 | 0.002 | N | 0.22 | 0.097 | 0.0954503805726 | gnomAD-4.0.0 | 5.12706E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.18322E-06 | 0 | 2.84608E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1881 | likely_benign | 0.1656 | benign | -0.712 | Destabilizing | 0.134 | N | 0.464 | neutral | None | None | None | None | N |
Q/C | 0.57 | likely_pathogenic | 0.487 | ambiguous | -0.079 | Destabilizing | 0.984 | D | 0.661 | prob.neutral | None | None | None | None | N |
Q/D | 0.3596 | ambiguous | 0.3316 | benign | -0.102 | Destabilizing | 0.272 | N | 0.401 | neutral | None | None | None | None | N |
Q/E | 0.0765 | likely_benign | 0.0731 | benign | 0.017 | Stabilizing | 0.002 | N | 0.22 | neutral | N | 0.33998431 | None | None | N |
Q/F | 0.5536 | ambiguous | 0.4705 | ambiguous | -0.33 | Destabilizing | 0.724 | D | 0.661 | prob.neutral | None | None | None | None | N |
Q/G | 0.3704 | ambiguous | 0.3354 | benign | -1.07 | Destabilizing | 0.428 | N | 0.585 | neutral | None | None | None | None | N |
Q/H | 0.2182 | likely_benign | 0.1973 | benign | -0.595 | Destabilizing | 0.002 | N | 0.227 | neutral | N | 0.455582116 | None | None | N |
Q/I | 0.2308 | likely_benign | 0.1981 | benign | 0.206 | Stabilizing | 0.272 | N | 0.654 | prob.neutral | None | None | None | None | N |
Q/K | 0.1595 | likely_benign | 0.1382 | benign | -0.166 | Destabilizing | 0.22 | N | 0.409 | neutral | N | 0.455888761 | None | None | N |
Q/L | 0.0984 | likely_benign | 0.0918 | benign | 0.206 | Stabilizing | 0.22 | N | 0.606 | neutral | N | 0.459179782 | None | None | N |
Q/M | 0.2507 | likely_benign | 0.2193 | benign | 0.431 | Stabilizing | 0.842 | D | 0.468 | neutral | None | None | None | None | N |
Q/N | 0.2676 | likely_benign | 0.2443 | benign | -0.755 | Destabilizing | 0.428 | N | 0.419 | neutral | None | None | None | None | N |
Q/P | 0.1364 | likely_benign | 0.1257 | benign | -0.07 | Destabilizing | 0.8 | D | 0.589 | neutral | N | 0.43822572 | None | None | N |
Q/R | 0.1745 | likely_benign | 0.1548 | benign | -0.074 | Destabilizing | 0.361 | N | 0.399 | neutral | N | 0.474455879 | None | None | N |
Q/S | 0.2106 | likely_benign | 0.1865 | benign | -0.945 | Destabilizing | 0.272 | N | 0.401 | neutral | None | None | None | None | N |
Q/T | 0.1579 | likely_benign | 0.1405 | benign | -0.62 | Destabilizing | 0.428 | N | 0.511 | neutral | None | None | None | None | N |
Q/V | 0.1475 | likely_benign | 0.1329 | benign | -0.07 | Destabilizing | 0.002 | N | 0.491 | neutral | None | None | None | None | N |
Q/W | 0.5552 | ambiguous | 0.5043 | ambiguous | -0.157 | Destabilizing | 0.984 | D | 0.656 | prob.neutral | None | None | None | None | N |
Q/Y | 0.4045 | ambiguous | 0.3555 | ambiguous | 0.056 | Stabilizing | 0.724 | D | 0.589 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.