Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23129 | 69610;69611;69612 | chr2:178576950;178576949;178576948 | chr2:179441677;179441676;179441675 |
N2AB | 21488 | 64687;64688;64689 | chr2:178576950;178576949;178576948 | chr2:179441677;179441676;179441675 |
N2A | 20561 | 61906;61907;61908 | chr2:178576950;178576949;178576948 | chr2:179441677;179441676;179441675 |
N2B | 14064 | 42415;42416;42417 | chr2:178576950;178576949;178576948 | chr2:179441677;179441676;179441675 |
Novex-1 | 14189 | 42790;42791;42792 | chr2:178576950;178576949;178576948 | chr2:179441677;179441676;179441675 |
Novex-2 | 14256 | 42991;42992;42993 | chr2:178576950;178576949;178576948 | chr2:179441677;179441676;179441675 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs755308234 | 0.006 | None | N | 0.222 | 0.168 | 0.310458034454 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/G | rs755308234 | 0.006 | None | N | 0.222 | 0.168 | 0.310458034454 | gnomAD-4.0.0 | 1.36883E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79941E-05 | 0 | 0 |
E/K | rs1394354671 | 0.666 | 0.181 | N | 0.387 | 0.274 | 0.290590437066 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs1394354671 | 0.666 | 0.181 | N | 0.387 | 0.274 | 0.290590437066 | gnomAD-4.0.0 | 1.59245E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43386E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1079 | likely_benign | 0.1009 | benign | -0.135 | Destabilizing | 0.001 | N | 0.287 | neutral | D | 0.529248448 | None | None | N |
E/C | 0.7055 | likely_pathogenic | 0.6419 | pathogenic | -0.274 | Destabilizing | 0.887 | D | 0.373 | neutral | None | None | None | None | N |
E/D | 0.0796 | likely_benign | 0.0724 | benign | -0.307 | Destabilizing | 0.001 | N | 0.183 | neutral | N | 0.482160838 | None | None | N |
E/F | 0.6294 | likely_pathogenic | 0.5576 | ambiguous | 0.008 | Stabilizing | 0.676 | D | 0.391 | neutral | None | None | None | None | N |
E/G | 0.1123 | likely_benign | 0.1113 | benign | -0.293 | Destabilizing | None | N | 0.222 | neutral | N | 0.487947736 | None | None | N |
E/H | 0.3584 | ambiguous | 0.3137 | benign | 0.595 | Stabilizing | 0.864 | D | 0.365 | neutral | None | None | None | None | N |
E/I | 0.2365 | likely_benign | 0.2056 | benign | 0.235 | Stabilizing | 0.507 | D | 0.451 | neutral | None | None | None | None | N |
E/K | 0.1016 | likely_benign | 0.0972 | benign | 0.378 | Stabilizing | 0.181 | N | 0.387 | neutral | N | 0.499313587 | None | None | N |
E/L | 0.2472 | likely_benign | 0.2134 | benign | 0.235 | Stabilizing | 0.128 | N | 0.448 | neutral | None | None | None | None | N |
E/M | 0.3221 | likely_benign | 0.2702 | benign | 0.018 | Stabilizing | 0.887 | D | 0.399 | neutral | None | None | None | None | N |
E/N | 0.1668 | likely_benign | 0.1484 | benign | -0.037 | Destabilizing | 0.128 | N | 0.374 | neutral | None | None | None | None | N |
E/P | 0.2593 | likely_benign | 0.2307 | benign | 0.13 | Stabilizing | 0.507 | D | 0.417 | neutral | None | None | None | None | N |
E/Q | 0.1106 | likely_benign | 0.1031 | benign | 0.012 | Stabilizing | 0.31 | N | 0.46 | neutral | N | 0.4949984 | None | None | N |
E/R | 0.1995 | likely_benign | 0.1849 | benign | 0.691 | Stabilizing | 0.507 | D | 0.357 | neutral | None | None | None | None | N |
E/S | 0.1304 | likely_benign | 0.1184 | benign | -0.163 | Destabilizing | 0.057 | N | 0.325 | neutral | None | None | None | None | N |
E/T | 0.1573 | likely_benign | 0.1406 | benign | -0.02 | Destabilizing | 0.128 | N | 0.348 | neutral | None | None | None | None | N |
E/V | 0.1501 | likely_benign | 0.1323 | benign | 0.13 | Stabilizing | 0.1 | N | 0.41 | neutral | N | 0.515331154 | None | None | N |
E/W | 0.8372 | likely_pathogenic | 0.7768 | pathogenic | 0.125 | Stabilizing | 0.96 | D | 0.449 | neutral | None | None | None | None | N |
E/Y | 0.49 | ambiguous | 0.4167 | ambiguous | 0.246 | Stabilizing | 0.864 | D | 0.418 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.