Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23130 | 69613;69614;69615 | chr2:178576947;178576946;178576945 | chr2:179441674;179441673;179441672 |
N2AB | 21489 | 64690;64691;64692 | chr2:178576947;178576946;178576945 | chr2:179441674;179441673;179441672 |
N2A | 20562 | 61909;61910;61911 | chr2:178576947;178576946;178576945 | chr2:179441674;179441673;179441672 |
N2B | 14065 | 42418;42419;42420 | chr2:178576947;178576946;178576945 | chr2:179441674;179441673;179441672 |
Novex-1 | 14190 | 42793;42794;42795 | chr2:178576947;178576946;178576945 | chr2:179441674;179441673;179441672 |
Novex-2 | 14257 | 42994;42995;42996 | chr2:178576947;178576946;178576945 | chr2:179441674;179441673;179441672 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.247 | N | 0.428 | 0.273 | 0.231873229951 | gnomAD-4.0.0 | 1.59241E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86061E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.066 | likely_benign | 0.0681 | benign | -0.776 | Destabilizing | 0.841 | D | 0.67 | prob.neutral | N | 0.48172386 | None | None | N |
P/C | 0.5643 | likely_pathogenic | 0.5479 | ambiguous | -0.665 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
P/D | 0.6921 | likely_pathogenic | 0.6813 | pathogenic | -0.586 | Destabilizing | 0.98 | D | 0.688 | prob.delet. | None | None | None | None | N |
P/E | 0.4097 | ambiguous | 0.419 | ambiguous | -0.664 | Destabilizing | 0.98 | D | 0.695 | prob.delet. | None | None | None | None | N |
P/F | 0.7305 | likely_pathogenic | 0.7051 | pathogenic | -0.759 | Destabilizing | 0.997 | D | 0.853 | deleterious | None | None | None | None | N |
P/G | 0.4079 | ambiguous | 0.4059 | ambiguous | -0.977 | Destabilizing | 0.875 | D | 0.74 | deleterious | None | None | None | None | N |
P/H | 0.4156 | ambiguous | 0.3995 | ambiguous | -0.468 | Destabilizing | 0.999 | D | 0.821 | deleterious | D | 0.544044473 | None | None | N |
P/I | 0.3762 | ambiguous | 0.4014 | ambiguous | -0.375 | Destabilizing | 0.99 | D | 0.862 | deleterious | None | None | None | None | N |
P/K | 0.512 | ambiguous | 0.4987 | ambiguous | -0.739 | Destabilizing | 0.98 | D | 0.672 | prob.neutral | None | None | None | None | N |
P/L | 0.2277 | likely_benign | 0.2169 | benign | -0.375 | Destabilizing | 0.974 | D | 0.761 | deleterious | N | 0.506568515 | None | None | N |
P/M | 0.4015 | ambiguous | 0.3944 | ambiguous | -0.386 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
P/N | 0.5173 | ambiguous | 0.5156 | ambiguous | -0.467 | Destabilizing | 0.98 | D | 0.817 | deleterious | None | None | None | None | N |
P/Q | 0.3137 | likely_benign | 0.313 | benign | -0.696 | Destabilizing | 0.98 | D | 0.733 | deleterious | None | None | None | None | N |
P/R | 0.3931 | ambiguous | 0.3817 | ambiguous | -0.174 | Destabilizing | 0.974 | D | 0.837 | deleterious | N | 0.513823444 | None | None | N |
P/S | 0.174 | likely_benign | 0.1736 | benign | -0.867 | Destabilizing | 0.247 | N | 0.428 | neutral | N | 0.503276832 | None | None | N |
P/T | 0.1347 | likely_benign | 0.1349 | benign | -0.843 | Destabilizing | 0.949 | D | 0.748 | deleterious | N | 0.501542086 | None | None | N |
P/V | 0.2352 | likely_benign | 0.2509 | benign | -0.473 | Destabilizing | 0.98 | D | 0.768 | deleterious | None | None | None | None | N |
P/W | 0.8407 | likely_pathogenic | 0.8244 | pathogenic | -0.865 | Destabilizing | 0.999 | D | 0.806 | deleterious | None | None | None | None | N |
P/Y | 0.707 | likely_pathogenic | 0.6886 | pathogenic | -0.58 | Destabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.