Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23147 | 69664;69665;69666 | chr2:178576805;178576804;178576803 | chr2:179441532;179441531;179441530 |
N2AB | 21506 | 64741;64742;64743 | chr2:178576805;178576804;178576803 | chr2:179441532;179441531;179441530 |
N2A | 20579 | 61960;61961;61962 | chr2:178576805;178576804;178576803 | chr2:179441532;179441531;179441530 |
N2B | 14082 | 42469;42470;42471 | chr2:178576805;178576804;178576803 | chr2:179441532;179441531;179441530 |
Novex-1 | 14207 | 42844;42845;42846 | chr2:178576805;178576804;178576803 | chr2:179441532;179441531;179441530 |
Novex-2 | 14274 | 43045;43046;43047 | chr2:178576805;178576804;178576803 | chr2:179441532;179441531;179441530 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1173953424 | -0.57 | 0.003 | N | 0.153 | 0.113 | 0.198526703765 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1173953424 | -0.57 | 0.003 | N | 0.153 | 0.113 | 0.198526703765 | gnomAD-4.0.0 | 1.59336E-06 | None | None | None | None | N | None | 0 | 2.29221E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs1396597790 | -1.026 | 0.722 | N | 0.657 | 0.302 | 0.424073947737 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs1396597790 | -1.026 | 0.722 | N | 0.657 | 0.302 | 0.424073947737 | gnomAD-4.0.0 | 1.59349E-06 | None | None | None | None | N | None | 0 | 2.29305E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.125 | likely_benign | 0.1258 | benign | -0.54 | Destabilizing | 0.565 | D | 0.602 | neutral | D | 0.523097975 | None | None | N |
E/C | 0.6734 | likely_pathogenic | 0.6778 | pathogenic | -0.13 | Destabilizing | 0.996 | D | 0.803 | deleterious | None | None | None | None | N |
E/D | 0.1554 | likely_benign | 0.1421 | benign | -0.531 | Destabilizing | 0.003 | N | 0.153 | neutral | N | 0.472356289 | None | None | N |
E/F | 0.6003 | likely_pathogenic | 0.5656 | pathogenic | -0.34 | Destabilizing | 0.923 | D | 0.787 | deleterious | None | None | None | None | N |
E/G | 0.2202 | likely_benign | 0.2184 | benign | -0.765 | Destabilizing | 0.722 | D | 0.657 | neutral | N | 0.481750812 | None | None | N |
E/H | 0.3167 | likely_benign | 0.3098 | benign | -0.222 | Destabilizing | 0.996 | D | 0.569 | neutral | None | None | None | None | N |
E/I | 0.1691 | likely_benign | 0.1599 | benign | 0.032 | Stabilizing | 0.858 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/K | 0.1165 | likely_benign | 0.1149 | benign | 0.194 | Stabilizing | 0.722 | D | 0.533 | neutral | N | 0.459699857 | None | None | N |
E/L | 0.2392 | likely_benign | 0.2334 | benign | 0.032 | Stabilizing | 0.633 | D | 0.673 | neutral | None | None | None | None | N |
E/M | 0.2794 | likely_benign | 0.27 | benign | 0.19 | Stabilizing | 0.989 | D | 0.765 | deleterious | None | None | None | None | N |
E/N | 0.2333 | likely_benign | 0.2171 | benign | -0.201 | Destabilizing | 0.858 | D | 0.545 | neutral | None | None | None | None | N |
E/P | 0.9255 | likely_pathogenic | 0.917 | pathogenic | -0.138 | Destabilizing | 0.961 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/Q | 0.103 | likely_benign | 0.1068 | benign | -0.157 | Destabilizing | 0.949 | D | 0.55 | neutral | N | 0.45777706 | None | None | N |
E/R | 0.1842 | likely_benign | 0.1826 | benign | 0.399 | Stabilizing | 0.961 | D | 0.577 | neutral | None | None | None | None | N |
E/S | 0.1681 | likely_benign | 0.1631 | benign | -0.355 | Destabilizing | 0.775 | D | 0.521 | neutral | None | None | None | None | N |
E/T | 0.1417 | likely_benign | 0.1363 | benign | -0.168 | Destabilizing | 0.775 | D | 0.645 | neutral | None | None | None | None | N |
E/V | 0.1001 | likely_benign | 0.0981 | benign | -0.138 | Destabilizing | 0.018 | N | 0.377 | neutral | N | 0.491140272 | None | None | N |
E/W | 0.8221 | likely_pathogenic | 0.806 | pathogenic | -0.143 | Destabilizing | 0.996 | D | 0.76 | deleterious | None | None | None | None | N |
E/Y | 0.5126 | ambiguous | 0.4802 | ambiguous | -0.086 | Destabilizing | 0.961 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.