Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23148 | 69667;69668;69669 | chr2:178576802;178576801;178576800 | chr2:179441529;179441528;179441527 |
N2AB | 21507 | 64744;64745;64746 | chr2:178576802;178576801;178576800 | chr2:179441529;179441528;179441527 |
N2A | 20580 | 61963;61964;61965 | chr2:178576802;178576801;178576800 | chr2:179441529;179441528;179441527 |
N2B | 14083 | 42472;42473;42474 | chr2:178576802;178576801;178576800 | chr2:179441529;179441528;179441527 |
Novex-1 | 14208 | 42847;42848;42849 | chr2:178576802;178576801;178576800 | chr2:179441529;179441528;179441527 |
Novex-2 | 14275 | 43048;43049;43050 | chr2:178576802;178576801;178576800 | chr2:179441529;179441528;179441527 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs777891798 | -0.221 | None | N | 0.177 | 0.143 | 0.139678290688 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.31E-05 | None | 0 | 0 | 0 |
V/I | rs777891798 | -0.221 | None | N | 0.177 | 0.143 | 0.139678290688 | gnomAD-4.0.0 | 1.5932E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43848E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4791 | ambiguous | 0.4901 | ambiguous | -1.571 | Destabilizing | 0.001 | N | 0.285 | neutral | N | 0.507533876 | None | None | N |
V/C | 0.8358 | likely_pathogenic | 0.822 | pathogenic | -1.385 | Destabilizing | 0.968 | D | 0.68 | prob.neutral | None | None | None | None | N |
V/D | 0.9416 | likely_pathogenic | 0.9486 | pathogenic | -1.043 | Destabilizing | 0.726 | D | 0.761 | deleterious | None | None | None | None | N |
V/E | 0.9052 | likely_pathogenic | 0.9141 | pathogenic | -1.001 | Destabilizing | 0.497 | N | 0.722 | prob.delet. | N | 0.508029184 | None | None | N |
V/F | 0.4328 | ambiguous | 0.427 | ambiguous | -1.209 | Destabilizing | 0.567 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/G | 0.663 | likely_pathogenic | 0.691 | pathogenic | -1.937 | Destabilizing | 0.331 | N | 0.718 | prob.delet. | N | 0.520840293 | None | None | N |
V/H | 0.9612 | likely_pathogenic | 0.961 | pathogenic | -1.535 | Destabilizing | 0.968 | D | 0.745 | deleterious | None | None | None | None | N |
V/I | 0.0726 | likely_benign | 0.0686 | benign | -0.65 | Destabilizing | None | N | 0.177 | neutral | N | 0.467247479 | None | None | N |
V/K | 0.9343 | likely_pathogenic | 0.9377 | pathogenic | -1.205 | Destabilizing | 0.567 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/L | 0.3973 | ambiguous | 0.371 | ambiguous | -0.65 | Destabilizing | 0.02 | N | 0.393 | neutral | N | 0.515097354 | None | None | N |
V/M | 0.3817 | ambiguous | 0.3533 | ambiguous | -0.664 | Destabilizing | 0.567 | D | 0.586 | neutral | None | None | None | None | N |
V/N | 0.8574 | likely_pathogenic | 0.8597 | pathogenic | -1.066 | Destabilizing | 0.726 | D | 0.761 | deleterious | None | None | None | None | N |
V/P | 0.7506 | likely_pathogenic | 0.7355 | pathogenic | -0.922 | Destabilizing | 0.726 | D | 0.735 | prob.delet. | None | None | None | None | N |
V/Q | 0.9217 | likely_pathogenic | 0.9222 | pathogenic | -1.148 | Destabilizing | 0.726 | D | 0.738 | prob.delet. | None | None | None | None | N |
V/R | 0.9049 | likely_pathogenic | 0.9131 | pathogenic | -0.854 | Destabilizing | 0.726 | D | 0.757 | deleterious | None | None | None | None | N |
V/S | 0.7257 | likely_pathogenic | 0.7313 | pathogenic | -1.725 | Destabilizing | 0.396 | N | 0.67 | neutral | None | None | None | None | N |
V/T | 0.5867 | likely_pathogenic | 0.5791 | pathogenic | -1.547 | Destabilizing | 0.272 | N | 0.572 | neutral | None | None | None | None | N |
V/W | 0.9588 | likely_pathogenic | 0.9549 | pathogenic | -1.388 | Destabilizing | 0.968 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/Y | 0.8564 | likely_pathogenic | 0.8473 | pathogenic | -1.074 | Destabilizing | 0.726 | D | 0.7 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.