Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2315 | 7168;7169;7170 | chr2:178774321;178774320;178774319 | chr2:179639048;179639047;179639046 |
N2AB | 2315 | 7168;7169;7170 | chr2:178774321;178774320;178774319 | chr2:179639048;179639047;179639046 |
N2A | 2315 | 7168;7169;7170 | chr2:178774321;178774320;178774319 | chr2:179639048;179639047;179639046 |
N2B | 2269 | 7030;7031;7032 | chr2:178774321;178774320;178774319 | chr2:179639048;179639047;179639046 |
Novex-1 | 2269 | 7030;7031;7032 | chr2:178774321;178774320;178774319 | chr2:179639048;179639047;179639046 |
Novex-2 | 2269 | 7030;7031;7032 | chr2:178774321;178774320;178774319 | chr2:179639048;179639047;179639046 |
Novex-3 | 2315 | 7168;7169;7170 | chr2:178774321;178774320;178774319 | chr2:179639048;179639047;179639046 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | None | N | 0.095 | 0.142 | 0.219573609325 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/K | None | None | 0.351 | N | 0.398 | 0.312 | 0.465549362696 | gnomAD-4.0.0 | 1.59058E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85673E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0859 | likely_benign | 0.0877 | benign | -0.746 | Destabilizing | None | N | 0.095 | neutral | N | 0.506275956 | None | None | N |
T/C | 0.4618 | ambiguous | 0.4836 | ambiguous | -0.355 | Destabilizing | 0.836 | D | 0.407 | neutral | None | None | None | None | N |
T/D | 0.4227 | ambiguous | 0.422 | ambiguous | -0.193 | Destabilizing | 0.418 | N | 0.394 | neutral | None | None | None | None | N |
T/E | 0.3691 | ambiguous | 0.3686 | ambiguous | -0.23 | Destabilizing | 0.418 | N | 0.39 | neutral | None | None | None | None | N |
T/F | 0.178 | likely_benign | 0.1811 | benign | -1.016 | Destabilizing | 0.716 | D | 0.467 | neutral | None | None | None | None | N |
T/G | 0.2562 | likely_benign | 0.263 | benign | -0.956 | Destabilizing | 0.129 | N | 0.363 | neutral | None | None | None | None | N |
T/H | 0.2556 | likely_benign | 0.2568 | benign | -1.31 | Destabilizing | 0.94 | D | 0.423 | neutral | None | None | None | None | N |
T/I | 0.1139 | likely_benign | 0.1173 | benign | -0.291 | Destabilizing | 0.085 | N | 0.396 | neutral | N | 0.507519865 | None | None | N |
T/K | 0.2891 | likely_benign | 0.2854 | benign | -0.649 | Destabilizing | 0.351 | N | 0.398 | neutral | N | 0.503918272 | None | None | N |
T/L | 0.0996 | likely_benign | 0.1025 | benign | -0.291 | Destabilizing | 0.129 | N | 0.369 | neutral | None | None | None | None | N |
T/M | 0.096 | likely_benign | 0.0995 | benign | 0.119 | Stabilizing | 0.716 | D | 0.423 | neutral | None | None | None | None | N |
T/N | 0.1147 | likely_benign | 0.1186 | benign | -0.483 | Destabilizing | 0.418 | N | 0.216 | neutral | None | None | None | None | N |
T/P | 0.5332 | ambiguous | 0.5551 | ambiguous | -0.412 | Destabilizing | 0.523 | D | 0.423 | neutral | D | 0.590049585 | None | None | N |
T/Q | 0.2657 | likely_benign | 0.2646 | benign | -0.724 | Destabilizing | 0.836 | D | 0.46 | neutral | None | None | None | None | N |
T/R | 0.2423 | likely_benign | 0.2375 | benign | -0.366 | Destabilizing | 0.523 | D | 0.428 | neutral | N | 0.48735299 | None | None | N |
T/S | 0.0924 | likely_benign | 0.0944 | benign | -0.734 | Destabilizing | 0.003 | N | 0.129 | neutral | N | 0.473545884 | None | None | N |
T/V | 0.1 | likely_benign | 0.1017 | benign | -0.412 | Destabilizing | 0.001 | N | 0.068 | neutral | None | None | None | None | N |
T/W | 0.6131 | likely_pathogenic | 0.608 | pathogenic | -0.945 | Destabilizing | 0.983 | D | 0.43 | neutral | None | None | None | None | N |
T/Y | 0.2679 | likely_benign | 0.2646 | benign | -0.71 | Destabilizing | 0.836 | D | 0.448 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.