Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23154 | 69685;69686;69687 | chr2:178576784;178576783;178576782 | chr2:179441511;179441510;179441509 |
N2AB | 21513 | 64762;64763;64764 | chr2:178576784;178576783;178576782 | chr2:179441511;179441510;179441509 |
N2A | 20586 | 61981;61982;61983 | chr2:178576784;178576783;178576782 | chr2:179441511;179441510;179441509 |
N2B | 14089 | 42490;42491;42492 | chr2:178576784;178576783;178576782 | chr2:179441511;179441510;179441509 |
Novex-1 | 14214 | 42865;42866;42867 | chr2:178576784;178576783;178576782 | chr2:179441511;179441510;179441509 |
Novex-2 | 14281 | 43066;43067;43068 | chr2:178576784;178576783;178576782 | chr2:179441511;179441510;179441509 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1486007034 | None | 0.004 | N | 0.21 | 0.102 | 0.19670166235 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/D | rs1486007034 | None | 0.004 | N | 0.21 | 0.102 | 0.19670166235 | gnomAD-4.0.0 | 2.03012E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40995E-06 | 0 | 0 |
N/I | None | None | 0.81 | N | 0.471 | 0.218 | 0.457106177737 | gnomAD-4.0.0 | 1.592E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85945E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2683 | likely_benign | 0.245 | benign | -0.651 | Destabilizing | 0.25 | N | 0.37 | neutral | None | None | None | None | N |
N/C | 0.3472 | ambiguous | 0.3196 | benign | 0.067 | Stabilizing | 0.992 | D | 0.474 | neutral | None | None | None | None | N |
N/D | 0.1436 | likely_benign | 0.1439 | benign | -1.075 | Destabilizing | 0.004 | N | 0.21 | neutral | N | 0.406908309 | None | None | N |
N/E | 0.3547 | ambiguous | 0.35 | ambiguous | -1.047 | Destabilizing | 0.447 | N | 0.342 | neutral | None | None | None | None | N |
N/F | 0.5082 | ambiguous | 0.4704 | ambiguous | -0.789 | Destabilizing | 0.92 | D | 0.469 | neutral | None | None | None | None | N |
N/G | 0.3158 | likely_benign | 0.292 | benign | -0.906 | Destabilizing | 0.25 | N | 0.367 | neutral | None | None | None | None | N |
N/H | 0.1401 | likely_benign | 0.1331 | benign | -0.849 | Destabilizing | 0.896 | D | 0.415 | neutral | N | 0.491239059 | None | None | N |
N/I | 0.3246 | likely_benign | 0.3279 | benign | -0.038 | Destabilizing | 0.81 | D | 0.471 | neutral | N | 0.477942604 | None | None | N |
N/K | 0.3649 | ambiguous | 0.3618 | ambiguous | -0.179 | Destabilizing | 0.379 | N | 0.367 | neutral | N | 0.518732305 | None | None | N |
N/L | 0.3107 | likely_benign | 0.2935 | benign | -0.038 | Destabilizing | 0.447 | N | 0.433 | neutral | None | None | None | None | N |
N/M | 0.305 | likely_benign | 0.2852 | benign | 0.631 | Stabilizing | 0.992 | D | 0.417 | neutral | None | None | None | None | N |
N/P | 0.9417 | likely_pathogenic | 0.9425 | pathogenic | -0.215 | Destabilizing | 0.92 | D | 0.444 | neutral | None | None | None | None | N |
N/Q | 0.3248 | likely_benign | 0.3137 | benign | -1.008 | Destabilizing | 0.85 | D | 0.427 | neutral | None | None | None | None | N |
N/R | 0.4502 | ambiguous | 0.4421 | ambiguous | 0.004 | Stabilizing | 0.85 | D | 0.409 | neutral | None | None | None | None | N |
N/S | 0.1061 | likely_benign | 0.1024 | benign | -0.666 | Destabilizing | 0.007 | N | 0.091 | neutral | N | 0.445194551 | None | None | N |
N/T | 0.1187 | likely_benign | 0.1045 | benign | -0.483 | Destabilizing | 0.016 | N | 0.202 | neutral | N | 0.452579097 | None | None | N |
N/V | 0.3115 | likely_benign | 0.3002 | benign | -0.215 | Destabilizing | 0.739 | D | 0.437 | neutral | None | None | None | None | N |
N/W | 0.7746 | likely_pathogenic | 0.765 | pathogenic | -0.622 | Destabilizing | 0.992 | D | 0.575 | neutral | None | None | None | None | N |
N/Y | 0.1575 | likely_benign | 0.1556 | benign | -0.36 | Destabilizing | 0.963 | D | 0.435 | neutral | N | 0.484690554 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.