Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23155 | 69688;69689;69690 | chr2:178576781;178576780;178576779 | chr2:179441508;179441507;179441506 |
N2AB | 21514 | 64765;64766;64767 | chr2:178576781;178576780;178576779 | chr2:179441508;179441507;179441506 |
N2A | 20587 | 61984;61985;61986 | chr2:178576781;178576780;178576779 | chr2:179441508;179441507;179441506 |
N2B | 14090 | 42493;42494;42495 | chr2:178576781;178576780;178576779 | chr2:179441508;179441507;179441506 |
Novex-1 | 14215 | 42868;42869;42870 | chr2:178576781;178576780;178576779 | chr2:179441508;179441507;179441506 |
Novex-2 | 14282 | 43069;43070;43071 | chr2:178576781;178576780;178576779 | chr2:179441508;179441507;179441506 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.317 | N | 0.652 | 0.161 | 0.288352970974 | gnomAD-4.0.0 | 6.84347E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99588E-07 | 0 | 0 |
T/S | rs761306433 | -1.385 | None | N | 0.194 | 0.054 | 0.104622674875 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
T/S | rs761306433 | -1.385 | None | N | 0.194 | 0.054 | 0.104622674875 | gnomAD-4.0.0 | 1.71087E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.24897E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0809 | likely_benign | 0.0836 | benign | -0.717 | Destabilizing | None | N | 0.143 | neutral | N | 0.431652038 | None | None | N |
T/C | 0.3347 | likely_benign | 0.3151 | benign | -0.749 | Destabilizing | 0.824 | D | 0.615 | neutral | None | None | None | None | N |
T/D | 0.6334 | likely_pathogenic | 0.6255 | pathogenic | -1.577 | Destabilizing | 0.081 | N | 0.607 | neutral | None | None | None | None | N |
T/E | 0.5256 | ambiguous | 0.5194 | ambiguous | -1.519 | Destabilizing | 0.081 | N | 0.589 | neutral | None | None | None | None | N |
T/F | 0.2192 | likely_benign | 0.2098 | benign | -0.746 | Destabilizing | 0.555 | D | 0.663 | neutral | None | None | None | None | N |
T/G | 0.2132 | likely_benign | 0.2011 | benign | -1.013 | Destabilizing | 0.035 | N | 0.548 | neutral | None | None | None | None | N |
T/H | 0.2757 | likely_benign | 0.2636 | benign | -1.354 | Destabilizing | 0.824 | D | 0.613 | neutral | None | None | None | None | N |
T/I | 0.3115 | likely_benign | 0.3286 | benign | -0.004 | Destabilizing | 0.317 | N | 0.652 | neutral | N | 0.473018307 | None | None | N |
T/K | 0.4742 | ambiguous | 0.4741 | ambiguous | -0.859 | Destabilizing | 0.081 | N | 0.597 | neutral | None | None | None | None | N |
T/L | 0.1453 | likely_benign | 0.1534 | benign | -0.004 | Destabilizing | 0.149 | N | 0.552 | neutral | None | None | None | None | N |
T/M | 0.0841 | likely_benign | 0.0853 | benign | 0.289 | Stabilizing | 0.791 | D | 0.625 | neutral | None | None | None | None | N |
T/N | 0.1694 | likely_benign | 0.1736 | benign | -1.205 | Destabilizing | 0.062 | N | 0.579 | neutral | N | 0.464321817 | None | None | N |
T/P | 0.9228 | likely_pathogenic | 0.9307 | pathogenic | -0.209 | Destabilizing | 0.317 | N | 0.665 | neutral | N | 0.490957978 | None | None | N |
T/Q | 0.3256 | likely_benign | 0.3285 | benign | -1.353 | Destabilizing | 0.38 | N | 0.666 | neutral | None | None | None | None | N |
T/R | 0.3854 | ambiguous | 0.3889 | ambiguous | -0.652 | Destabilizing | 0.38 | N | 0.668 | neutral | None | None | None | None | N |
T/S | 0.0833 | likely_benign | 0.077 | benign | -1.281 | Destabilizing | None | N | 0.194 | neutral | N | 0.343736691 | None | None | N |
T/V | 0.2119 | likely_benign | 0.2211 | benign | -0.209 | Destabilizing | 0.081 | N | 0.515 | neutral | None | None | None | None | N |
T/W | 0.6137 | likely_pathogenic | 0.6126 | pathogenic | -0.826 | Destabilizing | 0.935 | D | 0.64 | neutral | None | None | None | None | N |
T/Y | 0.2674 | likely_benign | 0.2699 | benign | -0.489 | Destabilizing | 0.555 | D | 0.635 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.