Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23156 | 69691;69692;69693 | chr2:178576778;178576777;178576776 | chr2:179441505;179441504;179441503 |
N2AB | 21515 | 64768;64769;64770 | chr2:178576778;178576777;178576776 | chr2:179441505;179441504;179441503 |
N2A | 20588 | 61987;61988;61989 | chr2:178576778;178576777;178576776 | chr2:179441505;179441504;179441503 |
N2B | 14091 | 42496;42497;42498 | chr2:178576778;178576777;178576776 | chr2:179441505;179441504;179441503 |
Novex-1 | 14216 | 42871;42872;42873 | chr2:178576778;178576777;178576776 | chr2:179441505;179441504;179441503 |
Novex-2 | 14283 | 43072;43073;43074 | chr2:178576778;178576777;178576776 | chr2:179441505;179441504;179441503 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs748627799 | -0.097 | 0.002 | N | 0.26 | 0.082 | 0.171388866994 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5265 | ambiguous | 0.5311 | ambiguous | -2.15 | Highly Destabilizing | 0.991 | D | 0.685 | prob.neutral | None | None | None | None | N |
A/D | 0.9927 | likely_pathogenic | 0.9943 | pathogenic | -2.697 | Highly Destabilizing | 0.989 | D | 0.793 | deleterious | N | 0.496421572 | None | None | N |
A/E | 0.9835 | likely_pathogenic | 0.9859 | pathogenic | -2.524 | Highly Destabilizing | 0.915 | D | 0.783 | deleterious | None | None | None | None | N |
A/F | 0.8824 | likely_pathogenic | 0.8995 | pathogenic | -1.124 | Destabilizing | 0.949 | D | 0.795 | deleterious | None | None | None | None | N |
A/G | 0.3672 | ambiguous | 0.39 | ambiguous | -1.858 | Destabilizing | 0.891 | D | 0.657 | neutral | N | 0.473544377 | None | None | N |
A/H | 0.9912 | likely_pathogenic | 0.9931 | pathogenic | -2.109 | Highly Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
A/I | 0.3531 | ambiguous | 0.3321 | benign | -0.201 | Destabilizing | 0.029 | N | 0.506 | neutral | None | None | None | None | N |
A/K | 0.9949 | likely_pathogenic | 0.9959 | pathogenic | -1.621 | Destabilizing | 0.915 | D | 0.796 | deleterious | None | None | None | None | N |
A/L | 0.3884 | ambiguous | 0.4018 | ambiguous | -0.201 | Destabilizing | 0.325 | N | 0.572 | neutral | None | None | None | None | N |
A/M | 0.468 | ambiguous | 0.501 | ambiguous | -0.668 | Destabilizing | 0.974 | D | 0.808 | deleterious | None | None | None | None | N |
A/N | 0.9749 | likely_pathogenic | 0.9798 | pathogenic | -1.969 | Destabilizing | 0.991 | D | 0.81 | deleterious | None | None | None | None | N |
A/P | 0.9922 | likely_pathogenic | 0.9918 | pathogenic | -0.56 | Destabilizing | 0.989 | D | 0.814 | deleterious | N | 0.496421572 | None | None | N |
A/Q | 0.9706 | likely_pathogenic | 0.9744 | pathogenic | -1.842 | Destabilizing | 0.991 | D | 0.824 | deleterious | None | None | None | None | N |
A/R | 0.9866 | likely_pathogenic | 0.9881 | pathogenic | -1.587 | Destabilizing | 0.974 | D | 0.819 | deleterious | None | None | None | None | N |
A/S | 0.3405 | ambiguous | 0.3529 | ambiguous | -2.434 | Highly Destabilizing | 0.891 | D | 0.633 | neutral | N | 0.464074176 | None | None | N |
A/T | 0.2579 | likely_benign | 0.2925 | benign | -2.125 | Highly Destabilizing | 0.801 | D | 0.621 | neutral | N | 0.466454033 | None | None | N |
A/V | 0.1326 | likely_benign | 0.1216 | benign | -0.56 | Destabilizing | 0.002 | N | 0.26 | neutral | N | 0.375459534 | None | None | N |
A/W | 0.994 | likely_pathogenic | 0.9953 | pathogenic | -1.735 | Destabilizing | 0.998 | D | 0.778 | deleterious | None | None | None | None | N |
A/Y | 0.9751 | likely_pathogenic | 0.9793 | pathogenic | -1.25 | Destabilizing | 0.974 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.