Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23157 | 69694;69695;69696 | chr2:178576775;178576774;178576773 | chr2:179441502;179441501;179441500 |
N2AB | 21516 | 64771;64772;64773 | chr2:178576775;178576774;178576773 | chr2:179441502;179441501;179441500 |
N2A | 20589 | 61990;61991;61992 | chr2:178576775;178576774;178576773 | chr2:179441502;179441501;179441500 |
N2B | 14092 | 42499;42500;42501 | chr2:178576775;178576774;178576773 | chr2:179441502;179441501;179441500 |
Novex-1 | 14217 | 42874;42875;42876 | chr2:178576775;178576774;178576773 | chr2:179441502;179441501;179441500 |
Novex-2 | 14284 | 43075;43076;43077 | chr2:178576775;178576774;178576773 | chr2:179441502;179441501;179441500 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1362003473 | -0.75 | 0.958 | N | 0.462 | 0.279 | 0.349429436713 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94175E-04 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs1362003473 | -0.75 | 0.958 | N | 0.462 | 0.279 | 0.349429436713 | gnomAD-4.0.0 | 6.57514E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.94175E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1727 | likely_benign | 0.2086 | benign | -0.892 | Destabilizing | 0.958 | D | 0.462 | neutral | N | 0.474802279 | None | None | N |
T/C | 0.6767 | likely_pathogenic | 0.6828 | pathogenic | -0.772 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
T/D | 0.8764 | likely_pathogenic | 0.8882 | pathogenic | -0.994 | Destabilizing | 0.998 | D | 0.758 | deleterious | None | None | None | None | N |
T/E | 0.8199 | likely_pathogenic | 0.8317 | pathogenic | -0.965 | Destabilizing | 0.995 | D | 0.728 | prob.delet. | None | None | None | None | N |
T/F | 0.4552 | ambiguous | 0.434 | ambiguous | -1.052 | Destabilizing | 0.991 | D | 0.802 | deleterious | None | None | None | None | N |
T/G | 0.63 | likely_pathogenic | 0.6892 | pathogenic | -1.161 | Destabilizing | 0.995 | D | 0.71 | prob.delet. | None | None | None | None | N |
T/H | 0.6597 | likely_pathogenic | 0.6766 | pathogenic | -1.539 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
T/I | 0.2677 | likely_benign | 0.244 | benign | -0.258 | Destabilizing | 0.976 | D | 0.667 | neutral | N | 0.481309966 | None | None | N |
T/K | 0.7882 | likely_pathogenic | 0.7938 | pathogenic | -0.804 | Destabilizing | 0.995 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/L | 0.181 | likely_benign | 0.1696 | benign | -0.258 | Destabilizing | 0.086 | N | 0.373 | neutral | None | None | None | None | N |
T/M | 0.1188 | likely_benign | 0.1157 | benign | 0.114 | Stabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
T/N | 0.4185 | ambiguous | 0.4643 | ambiguous | -0.966 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | N | 0.480322461 | None | None | N |
T/P | 0.8479 | likely_pathogenic | 0.87 | pathogenic | -0.438 | Destabilizing | 0.998 | D | 0.775 | deleterious | N | 0.519190771 | None | None | N |
T/Q | 0.6667 | likely_pathogenic | 0.6843 | pathogenic | -1.165 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
T/R | 0.7045 | likely_pathogenic | 0.7111 | pathogenic | -0.597 | Destabilizing | 0.995 | D | 0.777 | deleterious | None | None | None | None | N |
T/S | 0.2382 | likely_benign | 0.2875 | benign | -1.163 | Destabilizing | 0.979 | D | 0.46 | neutral | N | 0.514017131 | None | None | N |
T/V | 0.1614 | likely_benign | 0.1435 | benign | -0.438 | Destabilizing | 0.938 | D | 0.441 | neutral | None | None | None | None | N |
T/W | 0.793 | likely_pathogenic | 0.7907 | pathogenic | -1.017 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
T/Y | 0.5706 | likely_pathogenic | 0.5753 | pathogenic | -0.726 | Destabilizing | 0.995 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.