Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23158 | 69697;69698;69699 | chr2:178576772;178576771;178576770 | chr2:179441499;179441498;179441497 |
N2AB | 21517 | 64774;64775;64776 | chr2:178576772;178576771;178576770 | chr2:179441499;179441498;179441497 |
N2A | 20590 | 61993;61994;61995 | chr2:178576772;178576771;178576770 | chr2:179441499;179441498;179441497 |
N2B | 14093 | 42502;42503;42504 | chr2:178576772;178576771;178576770 | chr2:179441499;179441498;179441497 |
Novex-1 | 14218 | 42877;42878;42879 | chr2:178576772;178576771;178576770 | chr2:179441499;179441498;179441497 |
Novex-2 | 14285 | 43078;43079;43080 | chr2:178576772;178576771;178576770 | chr2:179441499;179441498;179441497 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.165 | 0.034 | 0.207176502487 | gnomAD-4.0.0 | 1.36867E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79916E-06 | 0 | 0 |
V/L | rs781570281 | -0.285 | 0.009 | N | 0.423 | 0.066 | 0.124217242631 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.64E-05 | 0 | 0 |
V/L | rs781570281 | -0.285 | 0.009 | N | 0.423 | 0.066 | 0.124217242631 | gnomAD-4.0.0 | 1.36867E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.74574E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8374 | likely_pathogenic | 0.8249 | pathogenic | -2.081 | Highly Destabilizing | 0.104 | N | 0.671 | neutral | N | 0.500112237 | None | None | N |
V/C | 0.9452 | likely_pathogenic | 0.9366 | pathogenic | -1.803 | Destabilizing | 0.968 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/D | 0.9984 | likely_pathogenic | 0.9976 | pathogenic | -2.82 | Highly Destabilizing | 0.667 | D | 0.886 | deleterious | N | 0.512647085 | None | None | N |
V/E | 0.9941 | likely_pathogenic | 0.9923 | pathogenic | -2.543 | Highly Destabilizing | 0.726 | D | 0.845 | deleterious | None | None | None | None | N |
V/F | 0.7186 | likely_pathogenic | 0.663 | pathogenic | -1.187 | Destabilizing | 0.497 | N | 0.728 | prob.delet. | N | 0.477146137 | None | None | N |
V/G | 0.96 | likely_pathogenic | 0.9527 | pathogenic | -2.679 | Highly Destabilizing | 0.667 | D | 0.868 | deleterious | N | 0.512393596 | None | None | N |
V/H | 0.9972 | likely_pathogenic | 0.9962 | pathogenic | -2.597 | Highly Destabilizing | 0.968 | D | 0.867 | deleterious | None | None | None | None | N |
V/I | 0.0668 | likely_benign | 0.0629 | benign | -0.382 | Destabilizing | None | N | 0.165 | neutral | N | 0.418893385 | None | None | N |
V/K | 0.9948 | likely_pathogenic | 0.9933 | pathogenic | -1.715 | Destabilizing | 0.726 | D | 0.845 | deleterious | None | None | None | None | N |
V/L | 0.217 | likely_benign | 0.1755 | benign | -0.382 | Destabilizing | 0.009 | N | 0.423 | neutral | N | 0.373205875 | None | None | N |
V/M | 0.4589 | ambiguous | 0.425 | ambiguous | -0.655 | Destabilizing | 0.567 | D | 0.661 | neutral | None | None | None | None | N |
V/N | 0.9933 | likely_pathogenic | 0.9915 | pathogenic | -2.207 | Highly Destabilizing | 0.89 | D | 0.88 | deleterious | None | None | None | None | N |
V/P | 0.9943 | likely_pathogenic | 0.9909 | pathogenic | -0.923 | Destabilizing | 0.89 | D | 0.846 | deleterious | None | None | None | None | N |
V/Q | 0.9915 | likely_pathogenic | 0.9892 | pathogenic | -1.926 | Destabilizing | 0.89 | D | 0.87 | deleterious | None | None | None | None | N |
V/R | 0.9893 | likely_pathogenic | 0.9866 | pathogenic | -1.755 | Destabilizing | 0.726 | D | 0.885 | deleterious | None | None | None | None | N |
V/S | 0.9736 | likely_pathogenic | 0.9712 | pathogenic | -2.826 | Highly Destabilizing | 0.726 | D | 0.809 | deleterious | None | None | None | None | N |
V/T | 0.925 | likely_pathogenic | 0.9211 | pathogenic | -2.386 | Highly Destabilizing | 0.272 | N | 0.651 | neutral | None | None | None | None | N |
V/W | 0.9956 | likely_pathogenic | 0.993 | pathogenic | -1.767 | Destabilizing | 0.968 | D | 0.832 | deleterious | None | None | None | None | N |
V/Y | 0.9815 | likely_pathogenic | 0.974 | pathogenic | -1.359 | Destabilizing | 0.726 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.