Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2316 | 7171;7172;7173 | chr2:178774318;178774317;178774316 | chr2:179639045;179639044;179639043 |
N2AB | 2316 | 7171;7172;7173 | chr2:178774318;178774317;178774316 | chr2:179639045;179639044;179639043 |
N2A | 2316 | 7171;7172;7173 | chr2:178774318;178774317;178774316 | chr2:179639045;179639044;179639043 |
N2B | 2270 | 7033;7034;7035 | chr2:178774318;178774317;178774316 | chr2:179639045;179639044;179639043 |
Novex-1 | 2270 | 7033;7034;7035 | chr2:178774318;178774317;178774316 | chr2:179639045;179639044;179639043 |
Novex-2 | 2270 | 7033;7034;7035 | chr2:178774318;178774317;178774316 | chr2:179639045;179639044;179639043 |
Novex-3 | 2316 | 7171;7172;7173 | chr2:178774318;178774317;178774316 | chr2:179639045;179639044;179639043 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 1.0 | N | 0.733 | 0.491 | 0.659138129972 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0786 | likely_benign | 0.0801 | benign | -0.343 | Destabilizing | 0.997 | D | 0.595 | neutral | N | 0.495324496 | None | None | N |
S/C | 0.1521 | likely_benign | 0.1628 | benign | -0.206 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | N | 0.51291992 | None | None | N |
S/D | 0.5266 | ambiguous | 0.5601 | ambiguous | -0.138 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
S/E | 0.6165 | likely_pathogenic | 0.6373 | pathogenic | -0.236 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
S/F | 0.2342 | likely_benign | 0.2412 | benign | -0.944 | Destabilizing | 1.0 | D | 0.788 | deleterious | N | 0.507091466 | None | None | N |
S/G | 0.1164 | likely_benign | 0.1175 | benign | -0.454 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
S/H | 0.4222 | ambiguous | 0.4426 | ambiguous | -1.026 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
S/I | 0.2395 | likely_benign | 0.2416 | benign | -0.182 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
S/K | 0.7228 | likely_pathogenic | 0.7511 | pathogenic | -0.521 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
S/L | 0.1284 | likely_benign | 0.1303 | benign | -0.182 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
S/M | 0.2447 | likely_benign | 0.2473 | benign | 0.187 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
S/N | 0.1638 | likely_benign | 0.1734 | benign | -0.237 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
S/P | 0.549 | ambiguous | 0.5787 | pathogenic | -0.207 | Destabilizing | 1.0 | D | 0.758 | deleterious | N | 0.513623843 | None | None | N |
S/Q | 0.5532 | ambiguous | 0.565 | pathogenic | -0.542 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
S/R | 0.6482 | likely_pathogenic | 0.6768 | pathogenic | -0.276 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
S/T | 0.0833 | likely_benign | 0.0847 | benign | -0.319 | Destabilizing | 0.999 | D | 0.673 | neutral | N | 0.506715774 | None | None | N |
S/V | 0.2046 | likely_benign | 0.2043 | benign | -0.207 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
S/W | 0.4391 | ambiguous | 0.458 | ambiguous | -0.949 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
S/Y | 0.2249 | likely_benign | 0.2323 | benign | -0.673 | Destabilizing | 1.0 | D | 0.787 | deleterious | D | 0.548574619 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.