Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23166 | 69721;69722;69723 | chr2:178576748;178576747;178576746 | chr2:179441475;179441474;179441473 |
N2AB | 21525 | 64798;64799;64800 | chr2:178576748;178576747;178576746 | chr2:179441475;179441474;179441473 |
N2A | 20598 | 62017;62018;62019 | chr2:178576748;178576747;178576746 | chr2:179441475;179441474;179441473 |
N2B | 14101 | 42526;42527;42528 | chr2:178576748;178576747;178576746 | chr2:179441475;179441474;179441473 |
Novex-1 | 14226 | 42901;42902;42903 | chr2:178576748;178576747;178576746 | chr2:179441475;179441474;179441473 |
Novex-2 | 14293 | 43102;43103;43104 | chr2:178576748;178576747;178576746 | chr2:179441475;179441474;179441473 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 1.0 | N | 0.699 | 0.571 | 0.634044673573 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8932 | likely_pathogenic | 0.874 | pathogenic | -0.233 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.489766209 | None | None | N |
D/C | 0.978 | likely_pathogenic | 0.9735 | pathogenic | 0.286 | Stabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
D/E | 0.8816 | likely_pathogenic | 0.8759 | pathogenic | -0.448 | Destabilizing | 1.0 | D | 0.489 | neutral | N | 0.485954321 | None | None | N |
D/F | 0.9849 | likely_pathogenic | 0.983 | pathogenic | -0.465 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
D/G | 0.856 | likely_pathogenic | 0.8326 | pathogenic | -0.448 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | N | 0.519266449 | None | None | N |
D/H | 0.911 | likely_pathogenic | 0.904 | pathogenic | -0.716 | Destabilizing | 1.0 | D | 0.665 | neutral | N | 0.499085053 | None | None | N |
D/I | 0.9645 | likely_pathogenic | 0.9604 | pathogenic | 0.285 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
D/K | 0.9708 | likely_pathogenic | 0.9672 | pathogenic | 0.326 | Stabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
D/L | 0.9634 | likely_pathogenic | 0.9583 | pathogenic | 0.285 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
D/M | 0.9832 | likely_pathogenic | 0.9811 | pathogenic | 0.691 | Stabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | N |
D/N | 0.2494 | likely_benign | 0.2316 | benign | 0.084 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | N | 0.51280641 | None | None | N |
D/P | 0.9846 | likely_pathogenic | 0.982 | pathogenic | 0.135 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
D/Q | 0.9605 | likely_pathogenic | 0.9576 | pathogenic | 0.122 | Stabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
D/R | 0.967 | likely_pathogenic | 0.9634 | pathogenic | 0.224 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
D/S | 0.5898 | likely_pathogenic | 0.5426 | ambiguous | -0.018 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
D/T | 0.7698 | likely_pathogenic | 0.7112 | pathogenic | 0.153 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
D/V | 0.921 | likely_pathogenic | 0.9079 | pathogenic | 0.135 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.506642696 | None | None | N |
D/W | 0.9963 | likely_pathogenic | 0.9962 | pathogenic | -0.441 | Destabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | N |
D/Y | 0.8925 | likely_pathogenic | 0.8789 | pathogenic | -0.25 | Destabilizing | 1.0 | D | 0.624 | neutral | D | 0.542143644 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.