Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23170 | 69733;69734;69735 | chr2:178576736;178576735;178576734 | chr2:179441463;179441462;179441461 |
N2AB | 21529 | 64810;64811;64812 | chr2:178576736;178576735;178576734 | chr2:179441463;179441462;179441461 |
N2A | 20602 | 62029;62030;62031 | chr2:178576736;178576735;178576734 | chr2:179441463;179441462;179441461 |
N2B | 14105 | 42538;42539;42540 | chr2:178576736;178576735;178576734 | chr2:179441463;179441462;179441461 |
Novex-1 | 14230 | 42913;42914;42915 | chr2:178576736;178576735;178576734 | chr2:179441463;179441462;179441461 |
Novex-2 | 14297 | 43114;43115;43116 | chr2:178576736;178576735;178576734 | chr2:179441463;179441462;179441461 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs760127657 | -0.375 | 0.006 | N | 0.051 | 0.01 | 0.163833314356 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/D | rs760127657 | -0.375 | 0.006 | N | 0.051 | 0.01 | 0.163833314356 | gnomAD-4.0.0 | 1.09485E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4393E-05 | 0 | 0 |
E/K | rs1334543067 | 0.365 | 0.963 | N | 0.429 | 0.274 | 0.3085936734 | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | I | None | 0 | 2.83E-05 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 1.57E-05 | 0 |
E/K | rs1334543067 | 0.365 | 0.963 | N | 0.429 | 0.274 | 0.3085936734 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs1334543067 | 0.365 | 0.963 | N | 0.429 | 0.274 | 0.3085936734 | gnomAD-4.0.0 | 1.15348E-05 | None | None | None | None | I | None | 1.69256E-05 | 1.69497E-05 | None | 0 | 0 | None | 0 | 2.24316E-04 | 7.18205E-06 | 1.34034E-05 | 5.69022E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1906 | likely_benign | 0.186 | benign | -0.392 | Destabilizing | 0.822 | D | 0.442 | neutral | N | 0.482907578 | None | None | I |
E/C | 0.8722 | likely_pathogenic | 0.8685 | pathogenic | 0.072 | Stabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | I |
E/D | 0.0953 | likely_benign | 0.0916 | benign | -0.309 | Destabilizing | 0.006 | N | 0.051 | neutral | N | 0.450872517 | None | None | I |
E/F | 0.8275 | likely_pathogenic | 0.8301 | pathogenic | -0.327 | Destabilizing | 0.993 | D | 0.609 | neutral | None | None | None | None | I |
E/G | 0.2676 | likely_benign | 0.2578 | benign | -0.587 | Destabilizing | 0.822 | D | 0.513 | neutral | N | 0.521484608 | None | None | I |
E/H | 0.568 | likely_pathogenic | 0.5712 | pathogenic | -0.193 | Destabilizing | 0.993 | D | 0.426 | neutral | None | None | None | None | I |
E/I | 0.4321 | ambiguous | 0.4361 | ambiguous | 0.088 | Stabilizing | 0.978 | D | 0.619 | neutral | None | None | None | None | I |
E/K | 0.2609 | likely_benign | 0.2869 | benign | 0.382 | Stabilizing | 0.963 | D | 0.429 | neutral | N | 0.481310067 | None | None | I |
E/L | 0.4799 | ambiguous | 0.4785 | ambiguous | 0.088 | Stabilizing | 0.956 | D | 0.537 | neutral | None | None | None | None | I |
E/M | 0.5563 | ambiguous | 0.5383 | ambiguous | 0.271 | Stabilizing | 0.998 | D | 0.583 | neutral | None | None | None | None | I |
E/N | 0.2873 | likely_benign | 0.2735 | benign | 0.083 | Stabilizing | 0.86 | D | 0.418 | neutral | None | None | None | None | I |
E/P | 0.319 | likely_benign | 0.2749 | benign | -0.052 | Destabilizing | 0.019 | N | 0.25 | neutral | None | None | None | None | I |
E/Q | 0.1974 | likely_benign | 0.2006 | benign | 0.116 | Stabilizing | 0.96 | D | 0.424 | neutral | N | 0.482542218 | None | None | I |
E/R | 0.3816 | ambiguous | 0.3934 | ambiguous | 0.507 | Stabilizing | 0.978 | D | 0.44 | neutral | None | None | None | None | I |
E/S | 0.2396 | likely_benign | 0.2323 | benign | -0.076 | Destabilizing | 0.86 | D | 0.404 | neutral | None | None | None | None | I |
E/T | 0.298 | likely_benign | 0.2944 | benign | 0.086 | Stabilizing | 0.86 | D | 0.501 | neutral | None | None | None | None | I |
E/V | 0.26 | likely_benign | 0.2617 | benign | -0.052 | Destabilizing | 0.97 | D | 0.497 | neutral | N | 0.480651629 | None | None | I |
E/W | 0.9365 | likely_pathogenic | 0.9361 | pathogenic | -0.188 | Destabilizing | 0.998 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/Y | 0.7077 | likely_pathogenic | 0.717 | pathogenic | -0.084 | Destabilizing | 0.993 | D | 0.587 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.