Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23184 | 69775;69776;69777 | chr2:178576694;178576693;178576692 | chr2:179441421;179441420;179441419 |
N2AB | 21543 | 64852;64853;64854 | chr2:178576694;178576693;178576692 | chr2:179441421;179441420;179441419 |
N2A | 20616 | 62071;62072;62073 | chr2:178576694;178576693;178576692 | chr2:179441421;179441420;179441419 |
N2B | 14119 | 42580;42581;42582 | chr2:178576694;178576693;178576692 | chr2:179441421;179441420;179441419 |
Novex-1 | 14244 | 42955;42956;42957 | chr2:178576694;178576693;178576692 | chr2:179441421;179441420;179441419 |
Novex-2 | 14311 | 43156;43157;43158 | chr2:178576694;178576693;178576692 | chr2:179441421;179441420;179441419 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1334258779 | -0.453 | 0.939 | N | 0.275 | 0.287 | 0.603223074362 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
L/P | rs1334258779 | -0.453 | 0.939 | N | 0.275 | 0.287 | 0.603223074362 | gnomAD-4.0.0 | 3.18326E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86582E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2248 | likely_benign | 0.2204 | benign | -0.425 | Destabilizing | 0.373 | N | 0.291 | neutral | None | None | None | None | N |
L/C | 0.5474 | ambiguous | 0.5765 | pathogenic | -0.806 | Destabilizing | 0.996 | D | 0.245 | neutral | None | None | None | None | N |
L/D | 0.738 | likely_pathogenic | 0.7154 | pathogenic | -0.009 | Destabilizing | 0.91 | D | 0.284 | neutral | None | None | None | None | N |
L/E | 0.4868 | ambiguous | 0.4742 | ambiguous | -0.094 | Destabilizing | 0.59 | D | 0.267 | neutral | None | None | None | None | N |
L/F | 0.1794 | likely_benign | 0.172 | benign | -0.569 | Destabilizing | 0.91 | D | 0.217 | neutral | None | None | None | None | N |
L/G | 0.3754 | ambiguous | 0.3893 | ambiguous | -0.518 | Destabilizing | 0.59 | D | 0.277 | neutral | None | None | None | None | N |
L/H | 0.2909 | likely_benign | 0.2904 | benign | 0.105 | Stabilizing | 0.987 | D | 0.279 | neutral | None | None | None | None | N |
L/I | 0.1082 | likely_benign | 0.1066 | benign | -0.295 | Destabilizing | 0.373 | N | 0.255 | neutral | None | None | None | None | N |
L/K | 0.3689 | ambiguous | 0.3671 | ambiguous | -0.274 | Destabilizing | 0.009 | N | 0.217 | neutral | None | None | None | None | N |
L/M | 0.1166 | likely_benign | 0.1136 | benign | -0.591 | Destabilizing | 0.078 | N | 0.205 | neutral | N | 0.399288903 | None | None | N |
L/N | 0.331 | likely_benign | 0.3296 | benign | -0.151 | Destabilizing | 0.91 | D | 0.285 | neutral | None | None | None | None | N |
L/P | 0.1882 | likely_benign | 0.1974 | benign | -0.312 | Destabilizing | 0.939 | D | 0.275 | neutral | N | 0.44798414 | None | None | N |
L/Q | 0.1682 | likely_benign | 0.1732 | benign | -0.296 | Destabilizing | 0.884 | D | 0.269 | neutral | N | 0.441095454 | None | None | N |
L/R | 0.2903 | likely_benign | 0.2917 | benign | 0.135 | Stabilizing | 0.792 | D | 0.26 | neutral | N | 0.449928368 | None | None | N |
L/S | 0.2395 | likely_benign | 0.2315 | benign | -0.569 | Destabilizing | 0.037 | N | 0.216 | neutral | None | None | None | None | N |
L/T | 0.1971 | likely_benign | 0.1941 | benign | -0.553 | Destabilizing | 0.59 | D | 0.239 | neutral | None | None | None | None | N |
L/V | 0.1002 | likely_benign | 0.0986 | benign | -0.312 | Destabilizing | 0.007 | N | 0.203 | neutral | N | 0.422915125 | None | None | N |
L/W | 0.3285 | likely_benign | 0.3271 | benign | -0.587 | Destabilizing | 0.996 | D | 0.325 | neutral | None | None | None | None | N |
L/Y | 0.4204 | ambiguous | 0.4158 | ambiguous | -0.358 | Destabilizing | 0.953 | D | 0.231 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.