Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23191 | 69796;69797;69798 | chr2:178576673;178576672;178576671 | chr2:179441400;179441399;179441398 |
N2AB | 21550 | 64873;64874;64875 | chr2:178576673;178576672;178576671 | chr2:179441400;179441399;179441398 |
N2A | 20623 | 62092;62093;62094 | chr2:178576673;178576672;178576671 | chr2:179441400;179441399;179441398 |
N2B | 14126 | 42601;42602;42603 | chr2:178576673;178576672;178576671 | chr2:179441400;179441399;179441398 |
Novex-1 | 14251 | 42976;42977;42978 | chr2:178576673;178576672;178576671 | chr2:179441400;179441399;179441398 |
Novex-2 | 14318 | 43177;43178;43179 | chr2:178576673;178576672;178576671 | chr2:179441400;179441399;179441398 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.999 | N | 0.556 | 0.291 | 0.391156786388 | gnomAD-4.0.0 | 9.57988E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.2594E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8205 | likely_pathogenic | 0.8536 | pathogenic | 0.017 | Stabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | N |
K/C | 0.9099 | likely_pathogenic | 0.9403 | pathogenic | -0.495 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
K/D | 0.9061 | likely_pathogenic | 0.9237 | pathogenic | -0.309 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
K/E | 0.7567 | likely_pathogenic | 0.826 | pathogenic | -0.323 | Destabilizing | 0.999 | D | 0.597 | neutral | N | 0.485425021 | None | None | N |
K/F | 0.9769 | likely_pathogenic | 0.9824 | pathogenic | -0.339 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
K/G | 0.7728 | likely_pathogenic | 0.8156 | pathogenic | -0.101 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
K/H | 0.5914 | likely_pathogenic | 0.6673 | pathogenic | -0.187 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
K/I | 0.9057 | likely_pathogenic | 0.923 | pathogenic | 0.243 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | N | 0.468300457 | None | None | N |
K/L | 0.8419 | likely_pathogenic | 0.8649 | pathogenic | 0.243 | Stabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
K/M | 0.7945 | likely_pathogenic | 0.8417 | pathogenic | -0.143 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
K/N | 0.8585 | likely_pathogenic | 0.8902 | pathogenic | -0.046 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.464163081 | None | None | N |
K/P | 0.7974 | likely_pathogenic | 0.8126 | pathogenic | 0.19 | Stabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
K/Q | 0.3936 | ambiguous | 0.4805 | ambiguous | -0.176 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.47184931 | None | None | N |
K/R | 0.0871 | likely_benign | 0.0912 | benign | -0.147 | Destabilizing | 0.999 | D | 0.556 | neutral | N | 0.472053079 | None | None | N |
K/S | 0.8243 | likely_pathogenic | 0.8555 | pathogenic | -0.39 | Destabilizing | 0.999 | D | 0.644 | neutral | None | None | None | None | N |
K/T | 0.6533 | likely_pathogenic | 0.7104 | pathogenic | -0.293 | Destabilizing | 1.0 | D | 0.659 | neutral | N | 0.492254993 | None | None | N |
K/V | 0.8664 | likely_pathogenic | 0.8866 | pathogenic | 0.19 | Stabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
K/W | 0.9392 | likely_pathogenic | 0.9582 | pathogenic | -0.458 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
K/Y | 0.9254 | likely_pathogenic | 0.9428 | pathogenic | -0.106 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.