Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23193 | 69802;69803;69804 | chr2:178576667;178576666;178576665 | chr2:179441394;179441393;179441392 |
N2AB | 21552 | 64879;64880;64881 | chr2:178576667;178576666;178576665 | chr2:179441394;179441393;179441392 |
N2A | 20625 | 62098;62099;62100 | chr2:178576667;178576666;178576665 | chr2:179441394;179441393;179441392 |
N2B | 14128 | 42607;42608;42609 | chr2:178576667;178576666;178576665 | chr2:179441394;179441393;179441392 |
Novex-1 | 14253 | 42982;42983;42984 | chr2:178576667;178576666;178576665 | chr2:179441394;179441393;179441392 |
Novex-2 | 14320 | 43183;43184;43185 | chr2:178576667;178576666;178576665 | chr2:179441394;179441393;179441392 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.92 | N | 0.491 | 0.324 | 0.589282225109 | gnomAD-4.0.0 | 1.5916E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02499E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.063 | likely_benign | 0.069 | benign | -0.921 | Destabilizing | 0.704 | D | 0.403 | neutral | N | 0.481461996 | None | None | N |
P/C | 0.48 | ambiguous | 0.5368 | ambiguous | -0.651 | Destabilizing | 0.999 | D | 0.497 | neutral | None | None | None | None | N |
P/D | 0.751 | likely_pathogenic | 0.7629 | pathogenic | -0.654 | Destabilizing | 0.939 | D | 0.401 | neutral | None | None | None | None | N |
P/E | 0.5003 | ambiguous | 0.5292 | ambiguous | -0.751 | Destabilizing | 0.939 | D | 0.378 | neutral | None | None | None | None | N |
P/F | 0.6065 | likely_pathogenic | 0.6439 | pathogenic | -0.993 | Destabilizing | 0.997 | D | 0.513 | neutral | None | None | None | None | N |
P/G | 0.3624 | ambiguous | 0.391 | ambiguous | -1.11 | Destabilizing | 0.939 | D | 0.456 | neutral | None | None | None | None | N |
P/H | 0.3099 | likely_benign | 0.3432 | ambiguous | -0.701 | Destabilizing | 0.999 | D | 0.449 | neutral | None | None | None | None | N |
P/I | 0.2674 | likely_benign | 0.3005 | benign | -0.553 | Destabilizing | 0.982 | D | 0.506 | neutral | None | None | None | None | N |
P/K | 0.388 | ambiguous | 0.4332 | ambiguous | -0.745 | Destabilizing | 0.939 | D | 0.388 | neutral | None | None | None | None | N |
P/L | 0.1203 | likely_benign | 0.1352 | benign | -0.553 | Destabilizing | 0.92 | D | 0.491 | neutral | N | 0.500375831 | None | None | N |
P/M | 0.2796 | likely_benign | 0.3105 | benign | -0.406 | Destabilizing | 0.999 | D | 0.452 | neutral | None | None | None | None | N |
P/N | 0.4655 | ambiguous | 0.4874 | ambiguous | -0.398 | Destabilizing | 0.939 | D | 0.433 | neutral | None | None | None | None | N |
P/Q | 0.2181 | likely_benign | 0.2548 | benign | -0.676 | Destabilizing | 0.988 | D | 0.413 | neutral | D | 0.52325269 | None | None | N |
P/R | 0.2494 | likely_benign | 0.2895 | benign | -0.183 | Destabilizing | 0.988 | D | 0.463 | neutral | N | 0.490137407 | None | None | N |
P/S | 0.152 | likely_benign | 0.1665 | benign | -0.8 | Destabilizing | 0.159 | N | 0.199 | neutral | N | 0.487022531 | None | None | N |
P/T | 0.1011 | likely_benign | 0.1071 | benign | -0.8 | Destabilizing | 0.061 | N | 0.195 | neutral | N | 0.463801742 | None | None | N |
P/V | 0.1639 | likely_benign | 0.1818 | benign | -0.64 | Destabilizing | 0.939 | D | 0.453 | neutral | None | None | None | None | N |
P/W | 0.7642 | likely_pathogenic | 0.7983 | pathogenic | -1.067 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | N |
P/Y | 0.5898 | likely_pathogenic | 0.6294 | pathogenic | -0.79 | Destabilizing | 0.997 | D | 0.513 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.