Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23194 | 69805;69806;69807 | chr2:178576664;178576663;178576662 | chr2:179441391;179441390;179441389 |
N2AB | 21553 | 64882;64883;64884 | chr2:178576664;178576663;178576662 | chr2:179441391;179441390;179441389 |
N2A | 20626 | 62101;62102;62103 | chr2:178576664;178576663;178576662 | chr2:179441391;179441390;179441389 |
N2B | 14129 | 42610;42611;42612 | chr2:178576664;178576663;178576662 | chr2:179441391;179441390;179441389 |
Novex-1 | 14254 | 42985;42986;42987 | chr2:178576664;178576663;178576662 | chr2:179441391;179441390;179441389 |
Novex-2 | 14321 | 43186;43187;43188 | chr2:178576664;178576663;178576662 | chr2:179441391;179441390;179441389 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs2046501912 | None | 0.003 | N | 0.227 | 0.08 | 0.165133752707 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs2046501912 | None | 0.003 | N | 0.227 | 0.08 | 0.165133752707 | gnomAD-4.0.0 | 2.10732E-05 | None | None | None | None | N | None | 1.33561E-05 | 0 | None | 0 | 2.23025E-05 | None | 0 | 0 | 2.62798E-05 | 0 | 1.60149E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3651 | ambiguous | 0.4079 | ambiguous | -1.744 | Destabilizing | 0.517 | D | 0.473 | neutral | N | 0.46492355 | None | None | N |
V/C | 0.788 | likely_pathogenic | 0.79 | pathogenic | -1.065 | Destabilizing | 0.996 | D | 0.676 | prob.neutral | None | None | None | None | N |
V/D | 0.9197 | likely_pathogenic | 0.9362 | pathogenic | -1.858 | Destabilizing | 0.983 | D | 0.752 | deleterious | N | 0.480861758 | None | None | N |
V/E | 0.8294 | likely_pathogenic | 0.8643 | pathogenic | -1.72 | Destabilizing | 0.987 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/F | 0.3737 | ambiguous | 0.3983 | ambiguous | -1.088 | Destabilizing | 0.901 | D | 0.669 | neutral | N | 0.483903632 | None | None | N |
V/G | 0.5168 | ambiguous | 0.5778 | pathogenic | -2.21 | Highly Destabilizing | 0.949 | D | 0.714 | prob.delet. | N | 0.496066089 | None | None | N |
V/H | 0.8792 | likely_pathogenic | 0.8985 | pathogenic | -1.942 | Destabilizing | 0.996 | D | 0.745 | deleterious | None | None | None | None | N |
V/I | 0.0848 | likely_benign | 0.0795 | benign | -0.491 | Destabilizing | 0.003 | N | 0.227 | neutral | N | 0.439482087 | None | None | N |
V/K | 0.8115 | likely_pathogenic | 0.8418 | pathogenic | -1.358 | Destabilizing | 0.961 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/L | 0.2305 | likely_benign | 0.2409 | benign | -0.491 | Destabilizing | 0.075 | N | 0.359 | neutral | N | 0.467850066 | None | None | N |
V/M | 0.2393 | likely_benign | 0.2529 | benign | -0.372 | Destabilizing | 0.923 | D | 0.605 | neutral | None | None | None | None | N |
V/N | 0.7324 | likely_pathogenic | 0.7594 | pathogenic | -1.386 | Destabilizing | 0.987 | D | 0.763 | deleterious | None | None | None | None | N |
V/P | 0.9182 | likely_pathogenic | 0.9268 | pathogenic | -0.877 | Destabilizing | 0.987 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/Q | 0.6883 | likely_pathogenic | 0.7443 | pathogenic | -1.35 | Destabilizing | 0.987 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/R | 0.755 | likely_pathogenic | 0.7977 | pathogenic | -1.109 | Destabilizing | 0.987 | D | 0.762 | deleterious | None | None | None | None | N |
V/S | 0.5226 | ambiguous | 0.5796 | pathogenic | -1.997 | Destabilizing | 0.961 | D | 0.645 | neutral | None | None | None | None | N |
V/T | 0.3991 | ambiguous | 0.4399 | ambiguous | -1.728 | Destabilizing | 0.775 | D | 0.55 | neutral | None | None | None | None | N |
V/W | 0.9638 | likely_pathogenic | 0.9642 | pathogenic | -1.52 | Destabilizing | 0.996 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/Y | 0.8382 | likely_pathogenic | 0.851 | pathogenic | -1.137 | Destabilizing | 0.961 | D | 0.702 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.