Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23197 | 69814;69815;69816 | chr2:178576655;178576654;178576653 | chr2:179441382;179441381;179441380 |
N2AB | 21556 | 64891;64892;64893 | chr2:178576655;178576654;178576653 | chr2:179441382;179441381;179441380 |
N2A | 20629 | 62110;62111;62112 | chr2:178576655;178576654;178576653 | chr2:179441382;179441381;179441380 |
N2B | 14132 | 42619;42620;42621 | chr2:178576655;178576654;178576653 | chr2:179441382;179441381;179441380 |
Novex-1 | 14257 | 42994;42995;42996 | chr2:178576655;178576654;178576653 | chr2:179441382;179441381;179441380 |
Novex-2 | 14324 | 43195;43196;43197 | chr2:178576655;178576654;178576653 | chr2:179441382;179441381;179441380 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs2046500337 | None | 0.994 | N | 0.742 | 0.206 | 0.521122704751 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 1.90042E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5971 | likely_pathogenic | 0.5739 | pathogenic | -1.854 | Destabilizing | 0.938 | D | 0.58 | neutral | None | None | None | None | N |
L/C | 0.597 | likely_pathogenic | 0.5894 | pathogenic | -1.053 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
L/D | 0.9483 | likely_pathogenic | 0.933 | pathogenic | -1.805 | Destabilizing | 0.991 | D | 0.79 | deleterious | None | None | None | None | N |
L/E | 0.7513 | likely_pathogenic | 0.7407 | pathogenic | -1.637 | Destabilizing | 0.991 | D | 0.784 | deleterious | None | None | None | None | N |
L/F | 0.4864 | ambiguous | 0.445 | ambiguous | -1.071 | Destabilizing | 0.994 | D | 0.742 | deleterious | N | 0.475644291 | None | None | N |
L/G | 0.7624 | likely_pathogenic | 0.7492 | pathogenic | -2.313 | Highly Destabilizing | 0.991 | D | 0.781 | deleterious | None | None | None | None | N |
L/H | 0.5977 | likely_pathogenic | 0.5656 | pathogenic | -1.564 | Destabilizing | 0.999 | D | 0.794 | deleterious | N | 0.471783177 | None | None | N |
L/I | 0.2227 | likely_benign | 0.2165 | benign | -0.576 | Destabilizing | 0.958 | D | 0.511 | neutral | N | 0.514822421 | None | None | N |
L/K | 0.5152 | ambiguous | 0.5187 | ambiguous | -1.343 | Destabilizing | 0.991 | D | 0.753 | deleterious | None | None | None | None | N |
L/M | 0.1856 | likely_benign | 0.1774 | benign | -0.476 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
L/N | 0.6 | likely_pathogenic | 0.5646 | pathogenic | -1.576 | Destabilizing | 0.991 | D | 0.785 | deleterious | None | None | None | None | N |
L/P | 0.6602 | likely_pathogenic | 0.6638 | pathogenic | -0.978 | Destabilizing | 0.994 | D | 0.793 | deleterious | N | 0.502893274 | None | None | N |
L/Q | 0.3322 | likely_benign | 0.337 | benign | -1.522 | Destabilizing | 0.995 | D | 0.787 | deleterious | None | None | None | None | N |
L/R | 0.3434 | ambiguous | 0.3563 | ambiguous | -0.992 | Destabilizing | 0.988 | D | 0.757 | deleterious | N | 0.470954214 | None | None | N |
L/S | 0.6568 | likely_pathogenic | 0.6143 | pathogenic | -2.221 | Highly Destabilizing | 0.982 | D | 0.725 | prob.delet. | None | None | None | None | N |
L/T | 0.2576 | likely_benign | 0.2353 | benign | -1.916 | Destabilizing | 0.18 | N | 0.351 | neutral | None | None | None | None | N |
L/V | 0.1749 | likely_benign | 0.1703 | benign | -0.978 | Destabilizing | 0.919 | D | 0.564 | neutral | N | 0.517169293 | None | None | N |
L/W | 0.6909 | likely_pathogenic | 0.6594 | pathogenic | -1.366 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
L/Y | 0.768 | likely_pathogenic | 0.7304 | pathogenic | -1.021 | Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.