Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23201 | 69826;69827;69828 | chr2:178576643;178576642;178576641 | chr2:179441370;179441369;179441368 |
N2AB | 21560 | 64903;64904;64905 | chr2:178576643;178576642;178576641 | chr2:179441370;179441369;179441368 |
N2A | 20633 | 62122;62123;62124 | chr2:178576643;178576642;178576641 | chr2:179441370;179441369;179441368 |
N2B | 14136 | 42631;42632;42633 | chr2:178576643;178576642;178576641 | chr2:179441370;179441369;179441368 |
Novex-1 | 14261 | 43006;43007;43008 | chr2:178576643;178576642;178576641 | chr2:179441370;179441369;179441368 |
Novex-2 | 14328 | 43207;43208;43209 | chr2:178576643;178576642;178576641 | chr2:179441370;179441369;179441368 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.767 | N | 0.235 | 0.154 | 0.42805410278 | gnomAD-4.0.0 | 1.36855E-06 | None | None | None | None | N | None | 5.97907E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | None | None | 0.981 | N | 0.604 | 0.269 | 0.380901646489 | gnomAD-4.0.0 | 6.84274E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15945E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6352 | likely_pathogenic | 0.6722 | pathogenic | -1.953 | Destabilizing | 0.998 | D | 0.602 | neutral | D | 0.526663929 | None | None | N |
V/C | 0.9282 | likely_pathogenic | 0.9352 | pathogenic | -1.561 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
V/D | 0.9863 | likely_pathogenic | 0.9915 | pathogenic | -1.755 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
V/E | 0.9594 | likely_pathogenic | 0.9715 | pathogenic | -1.629 | Destabilizing | 1.0 | D | 0.819 | deleterious | D | 0.533566178 | None | None | N |
V/F | 0.5789 | likely_pathogenic | 0.6238 | pathogenic | -1.277 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
V/G | 0.8475 | likely_pathogenic | 0.88 | pathogenic | -2.424 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | D | 0.533566178 | None | None | N |
V/H | 0.9863 | likely_pathogenic | 0.9904 | pathogenic | -1.959 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/I | 0.0928 | likely_benign | 0.0927 | benign | -0.695 | Destabilizing | 0.767 | D | 0.235 | neutral | N | 0.482792934 | None | None | N |
V/K | 0.9791 | likely_pathogenic | 0.9845 | pathogenic | -1.633 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
V/L | 0.4537 | ambiguous | 0.472 | ambiguous | -0.695 | Destabilizing | 0.981 | D | 0.604 | neutral | N | 0.501951911 | None | None | N |
V/M | 0.4358 | ambiguous | 0.4669 | ambiguous | -0.653 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
V/N | 0.9573 | likely_pathogenic | 0.9714 | pathogenic | -1.653 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/P | 0.9802 | likely_pathogenic | 0.9849 | pathogenic | -1.082 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
V/Q | 0.9625 | likely_pathogenic | 0.9714 | pathogenic | -1.628 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/R | 0.971 | likely_pathogenic | 0.9786 | pathogenic | -1.301 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/S | 0.8874 | likely_pathogenic | 0.9135 | pathogenic | -2.347 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/T | 0.7963 | likely_pathogenic | 0.8278 | pathogenic | -2.073 | Highly Destabilizing | 0.998 | D | 0.635 | neutral | None | None | None | None | N |
V/W | 0.9885 | likely_pathogenic | 0.9912 | pathogenic | -1.573 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
V/Y | 0.9396 | likely_pathogenic | 0.9509 | pathogenic | -1.253 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.