Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23206 | 69841;69842;69843 | chr2:178576628;178576627;178576626 | chr2:179441355;179441354;179441353 |
N2AB | 21565 | 64918;64919;64920 | chr2:178576628;178576627;178576626 | chr2:179441355;179441354;179441353 |
N2A | 20638 | 62137;62138;62139 | chr2:178576628;178576627;178576626 | chr2:179441355;179441354;179441353 |
N2B | 14141 | 42646;42647;42648 | chr2:178576628;178576627;178576626 | chr2:179441355;179441354;179441353 |
Novex-1 | 14266 | 43021;43022;43023 | chr2:178576628;178576627;178576626 | chr2:179441355;179441354;179441353 |
Novex-2 | 14333 | 43222;43223;43224 | chr2:178576628;178576627;178576626 | chr2:179441355;179441354;179441353 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1244129033 | 0.27 | 0.997 | N | 0.726 | 0.342 | 0.367803931526 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/Q | rs1244129033 | 0.27 | 0.997 | N | 0.726 | 0.342 | 0.367803931526 | gnomAD-4.0.0 | 2.05282E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69867E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2121 | likely_benign | 0.1935 | benign | -0.6 | Destabilizing | 0.977 | D | 0.651 | neutral | D | 0.522865901 | None | None | N |
E/C | 0.9313 | likely_pathogenic | 0.9242 | pathogenic | -0.022 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/D | 0.2467 | likely_benign | 0.2346 | benign | -0.541 | Destabilizing | 0.117 | N | 0.215 | neutral | N | 0.507376712 | None | None | N |
E/F | 0.924 | likely_pathogenic | 0.9168 | pathogenic | -0.599 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/G | 0.3407 | ambiguous | 0.3493 | ambiguous | -0.817 | Destabilizing | 0.993 | D | 0.627 | neutral | N | 0.512403141 | None | None | N |
E/H | 0.7455 | likely_pathogenic | 0.7386 | pathogenic | -0.622 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/I | 0.5658 | likely_pathogenic | 0.5287 | ambiguous | -0.055 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/K | 0.3565 | ambiguous | 0.357 | ambiguous | 0.119 | Stabilizing | 0.977 | D | 0.658 | neutral | N | 0.481675133 | None | None | N |
E/L | 0.68 | likely_pathogenic | 0.6472 | pathogenic | -0.055 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/M | 0.6825 | likely_pathogenic | 0.6632 | pathogenic | 0.263 | Stabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
E/N | 0.472 | ambiguous | 0.4471 | ambiguous | -0.138 | Destabilizing | 0.99 | D | 0.744 | deleterious | None | None | None | None | N |
E/P | 0.4694 | ambiguous | 0.4016 | ambiguous | -0.216 | Destabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | N |
E/Q | 0.2429 | likely_benign | 0.2445 | benign | -0.125 | Destabilizing | 0.997 | D | 0.726 | prob.delet. | N | 0.473534832 | None | None | N |
E/R | 0.516 | ambiguous | 0.523 | ambiguous | 0.229 | Stabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/S | 0.3671 | ambiguous | 0.343 | ambiguous | -0.327 | Destabilizing | 0.983 | D | 0.666 | neutral | None | None | None | None | N |
E/T | 0.4038 | ambiguous | 0.3777 | ambiguous | -0.156 | Destabilizing | 0.998 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/V | 0.3523 | ambiguous | 0.3339 | benign | -0.216 | Destabilizing | 0.997 | D | 0.669 | neutral | N | 0.492399555 | None | None | N |
E/W | 0.9732 | likely_pathogenic | 0.9718 | pathogenic | -0.461 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/Y | 0.8571 | likely_pathogenic | 0.8478 | pathogenic | -0.363 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.