Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23207 | 69844;69845;69846 | chr2:178576625;178576624;178576623 | chr2:179441352;179441351;179441350 |
N2AB | 21566 | 64921;64922;64923 | chr2:178576625;178576624;178576623 | chr2:179441352;179441351;179441350 |
N2A | 20639 | 62140;62141;62142 | chr2:178576625;178576624;178576623 | chr2:179441352;179441351;179441350 |
N2B | 14142 | 42649;42650;42651 | chr2:178576625;178576624;178576623 | chr2:179441352;179441351;179441350 |
Novex-1 | 14267 | 43024;43025;43026 | chr2:178576625;178576624;178576623 | chr2:179441352;179441351;179441350 |
Novex-2 | 14334 | 43225;43226;43227 | chr2:178576625;178576624;178576623 | chr2:179441352;179441351;179441350 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | None | None | 0.568 | N | 0.549 | 0.343 | 0.434384183301 | gnomAD-4.0.0 | 1.5916E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85914E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3603 | ambiguous | 0.3567 | ambiguous | -0.531 | Destabilizing | 0.977 | D | 0.619 | neutral | N | 0.489381951 | None | None | N |
G/C | 0.4438 | ambiguous | 0.4582 | ambiguous | -0.919 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
G/D | 0.2106 | likely_benign | 0.2249 | benign | -0.892 | Destabilizing | 0.99 | D | 0.735 | prob.delet. | None | None | None | None | N |
G/E | 0.3624 | ambiguous | 0.3945 | ambiguous | -1.034 | Destabilizing | 0.568 | D | 0.549 | neutral | N | 0.480494407 | None | None | N |
G/F | 0.7677 | likely_pathogenic | 0.7599 | pathogenic | -1.109 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
G/H | 0.5446 | ambiguous | 0.5484 | ambiguous | -0.843 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
G/I | 0.7336 | likely_pathogenic | 0.7479 | pathogenic | -0.501 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
G/K | 0.6463 | likely_pathogenic | 0.6645 | pathogenic | -1.095 | Destabilizing | 0.289 | N | 0.555 | neutral | None | None | None | None | N |
G/L | 0.7315 | likely_pathogenic | 0.7243 | pathogenic | -0.501 | Destabilizing | 0.995 | D | 0.796 | deleterious | None | None | None | None | N |
G/M | 0.7246 | likely_pathogenic | 0.7132 | pathogenic | -0.416 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
G/N | 0.2286 | likely_benign | 0.221 | benign | -0.704 | Destabilizing | 0.995 | D | 0.827 | deleterious | None | None | None | None | N |
G/P | 0.9805 | likely_pathogenic | 0.9777 | pathogenic | -0.474 | Destabilizing | 0.998 | D | 0.847 | deleterious | None | None | None | None | N |
G/Q | 0.5268 | ambiguous | 0.5475 | ambiguous | -1.007 | Destabilizing | 0.995 | D | 0.836 | deleterious | None | None | None | None | N |
G/R | 0.5711 | likely_pathogenic | 0.5962 | pathogenic | -0.603 | Destabilizing | 0.987 | D | 0.819 | deleterious | N | 0.512361278 | None | None | N |
G/S | 0.194 | likely_benign | 0.1879 | benign | -0.885 | Destabilizing | 0.983 | D | 0.768 | deleterious | None | None | None | None | N |
G/T | 0.3939 | ambiguous | 0.3787 | ambiguous | -0.961 | Destabilizing | 0.995 | D | 0.819 | deleterious | None | None | None | None | N |
G/V | 0.6159 | likely_pathogenic | 0.6263 | pathogenic | -0.474 | Destabilizing | 0.997 | D | 0.807 | deleterious | D | 0.527111398 | None | None | N |
G/W | 0.6457 | likely_pathogenic | 0.6576 | pathogenic | -1.294 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
G/Y | 0.5823 | likely_pathogenic | 0.5743 | pathogenic | -0.949 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.