Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2321 | 7186;7187;7188 | chr2:178774303;178774302;178774301 | chr2:179639030;179639029;179639028 |
N2AB | 2321 | 7186;7187;7188 | chr2:178774303;178774302;178774301 | chr2:179639030;179639029;179639028 |
N2A | 2321 | 7186;7187;7188 | chr2:178774303;178774302;178774301 | chr2:179639030;179639029;179639028 |
N2B | 2275 | 7048;7049;7050 | chr2:178774303;178774302;178774301 | chr2:179639030;179639029;179639028 |
Novex-1 | 2275 | 7048;7049;7050 | chr2:178774303;178774302;178774301 | chr2:179639030;179639029;179639028 |
Novex-2 | 2275 | 7048;7049;7050 | chr2:178774303;178774302;178774301 | chr2:179639030;179639029;179639028 |
Novex-3 | 2321 | 7186;7187;7188 | chr2:178774303;178774302;178774301 | chr2:179639030;179639029;179639028 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.454 | N | 0.603 | 0.349 | 0.117506650769 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.4963 | ambiguous | 0.4683 | ambiguous | -1.238 | Destabilizing | 0.688 | D | 0.697 | prob.neutral | None | None | None | None | N |
Q/C | 0.6312 | likely_pathogenic | 0.5998 | pathogenic | -0.936 | Destabilizing | 0.998 | D | 0.749 | deleterious | None | None | None | None | N |
Q/D | 0.8364 | likely_pathogenic | 0.7966 | pathogenic | -2.323 | Highly Destabilizing | 0.915 | D | 0.671 | neutral | None | None | None | None | N |
Q/E | 0.1943 | likely_benign | 0.1809 | benign | -1.994 | Destabilizing | 0.625 | D | 0.542 | neutral | N | 0.447361167 | None | None | N |
Q/F | 0.7228 | likely_pathogenic | 0.6808 | pathogenic | -0.913 | Destabilizing | 0.974 | D | 0.783 | deleterious | None | None | None | None | N |
Q/G | 0.629 | likely_pathogenic | 0.5903 | pathogenic | -1.673 | Destabilizing | 0.915 | D | 0.733 | prob.delet. | None | None | None | None | N |
Q/H | 0.2229 | likely_benign | 0.1971 | benign | -1.434 | Destabilizing | 0.005 | N | 0.391 | neutral | N | 0.28588478 | None | None | N |
Q/I | 0.5014 | ambiguous | 0.481 | ambiguous | -0.036 | Destabilizing | 0.974 | D | 0.787 | deleterious | None | None | None | None | N |
Q/K | 0.2007 | likely_benign | 0.1894 | benign | -0.426 | Destabilizing | 0.454 | N | 0.603 | neutral | N | 0.431244944 | None | None | N |
Q/L | 0.235 | likely_benign | 0.2149 | benign | -0.036 | Destabilizing | 0.801 | D | 0.735 | prob.delet. | N | 0.412228676 | None | None | N |
Q/M | 0.4616 | ambiguous | 0.4472 | ambiguous | -0.022 | Destabilizing | 0.991 | D | 0.729 | prob.delet. | None | None | None | None | N |
Q/N | 0.4897 | ambiguous | 0.4403 | ambiguous | -1.414 | Destabilizing | 0.842 | D | 0.664 | neutral | None | None | None | None | N |
Q/P | 0.8886 | likely_pathogenic | 0.8482 | pathogenic | -0.414 | Destabilizing | 0.989 | D | 0.749 | deleterious | N | 0.447361167 | None | None | N |
Q/R | 0.1853 | likely_benign | 0.1701 | benign | -0.785 | Destabilizing | 0.012 | N | 0.451 | neutral | N | 0.381442879 | None | None | N |
Q/S | 0.5328 | ambiguous | 0.4998 | ambiguous | -1.653 | Destabilizing | 0.688 | D | 0.629 | neutral | None | None | None | None | N |
Q/T | 0.4372 | ambiguous | 0.4058 | ambiguous | -1.141 | Destabilizing | 0.915 | D | 0.719 | prob.delet. | None | None | None | None | N |
Q/V | 0.3682 | ambiguous | 0.3599 | ambiguous | -0.414 | Destabilizing | 0.915 | D | 0.74 | deleterious | None | None | None | None | N |
Q/W | 0.6449 | likely_pathogenic | 0.6014 | pathogenic | -1.109 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
Q/Y | 0.4475 | ambiguous | 0.4003 | ambiguous | -0.643 | Destabilizing | 0.842 | D | 0.724 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.